nsv6627286
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:58,324
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 883 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 883 SVs from 82 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6627286 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000022.11 | Chr22 | 42,514,136 | 42,572,459 |
| nsv6627286 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000022.10 | Chr22 | 42,910,142 | 42,968,465 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18316969 | duplication | OSC0871 | SNP array | Probe signal intensity | nssv18317210, nssv18317206, nssv18316716 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18316969 | Remapped | Perfect | NC_000022.11:g.(?_ 42514136)_(4257245 9_?)dup | GRCh38.p12 | First Pass | NC_000022.11 | Chr22 | 42,514,136 | 42,572,459 |
| nssv18316969 | Submitted genomic | NC_000022.10:g.(?_ 42910142)_(4296846 5_?)dup | GRCh37 (hg19) | NC_000022.10 | Chr22 | 42,910,142 | 42,968,465 |