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dbVar

Database of genomic structural variation

nsv6627203

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:7
Validation:Not tested
Clinical Assertions: No
Region Size:35,708

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 645 SVs from 64 studies. See in: genome view

Remapped(Score: Good):268,428-304,135

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6627203	Remapped	Good	GRCh38.p12	ALT_REF_LOCI_1	First Pass	NT_187633.1	Chr22\|NT_1 87633.1	268,428	304,135
nsv6627203	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000022.10	Chr22	24,374,253	24,410,374

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18317144	duplication	OSC8313	SNP array	Probe signal intensity	8
nssv18317652	duplication	OSC8623	SNP array	Probe signal intensity	7
nssv18317711	duplication	OSC8396	SNP array	Probe signal intensity	8
nssv18317723	duplication	OSC8406	SNP array	Probe signal intensity	9
nssv18317922	duplication	OSC8553	SNP array	Probe signal intensity	10
nssv18318831	duplication	OSC8785	SNP array	Probe signal intensity	9
nssv18318923	duplication	OSC8614	SNP array	Probe signal intensity	12

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18317144	Remapped	Good	NT_187633.1:g.(?_2 68428)_(304135_?)d up	GRCh38.p12	First Pass	NT_187633.1	Chr22\|NT_1 87633.1	268,428	304,135
nssv18317652	Remapped	Good	NT_187633.1:g.(?_2 68428)_(304135_?)d up	GRCh38.p12	First Pass	NT_187633.1	Chr22\|NT_1 87633.1	268,428	304,135
nssv18317711	Remapped	Good	NT_187633.1:g.(?_2 68428)_(304135_?)d up	GRCh38.p12	First Pass	NT_187633.1	Chr22\|NT_1 87633.1	268,428	304,135
nssv18317723	Remapped	Good	NT_187633.1:g.(?_2 68428)_(304135_?)d up	GRCh38.p12	First Pass	NT_187633.1	Chr22\|NT_1 87633.1	268,428	304,135
nssv18317922	Remapped	Good	NT_187633.1:g.(?_2 68428)_(304135_?)d up	GRCh38.p12	First Pass	NT_187633.1	Chr22\|NT_1 87633.1	268,428	304,135
nssv18318831	Remapped	Good	NT_187633.1:g.(?_2 68428)_(304135_?)d up	GRCh38.p12	First Pass	NT_187633.1	Chr22\|NT_1 87633.1	268,428	304,135
nssv18318923	Remapped	Good	NT_187633.1:g.(?_2 68428)_(304135_?)d up	GRCh38.p12	First Pass	NT_187633.1	Chr22\|NT_1 87633.1	268,428	304,135
nssv18317144	Submitted genomic		NC_000022.10:g.(?_ 24374253)_(2441037 4_?)dup	GRCh37 (hg19)		NC_000022.10	Chr22	24,374,253	24,410,374
nssv18317652	Submitted genomic		NC_000022.10:g.(?_ 24374253)_(2441037 4_?)dup	GRCh37 (hg19)		NC_000022.10	Chr22	24,374,253	24,410,374
nssv18317711	Submitted genomic		NC_000022.10:g.(?_ 24374253)_(2441037 4_?)dup	GRCh37 (hg19)		NC_000022.10	Chr22	24,374,253	24,410,374
nssv18317723	Submitted genomic		NC_000022.10:g.(?_ 24374253)_(2441037 4_?)dup	GRCh37 (hg19)		NC_000022.10	Chr22	24,374,253	24,410,374
nssv18317922	Submitted genomic		NC_000022.10:g.(?_ 24374253)_(2441037 4_?)dup	GRCh37 (hg19)		NC_000022.10	Chr22	24,374,253	24,410,374
nssv18318831	Submitted genomic		NC_000022.10:g.(?_ 24374253)_(2441037 4_?)dup	GRCh37 (hg19)		NC_000022.10	Chr22	24,374,253	24,410,374
nssv18318923	Submitted genomic		NC_000022.10:g.(?_ 24374253)_(2441037 4_?)dup	GRCh37 (hg19)		NC_000022.10	Chr22	24,374,253	24,410,374

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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