nsv6626279

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:32
Validation:Not tested
Clinical Assertions: No
Region Size:78,117

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 421 SVs from 70 studies. See in: genome view

Remapped(Score: Perfect):72,546,545-72,624,661

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6626279	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nsv6626279	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	73,012,228	73,090,344

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18281870	deletion	OSC2217	SNP array	Probe signal intensity	6
nssv18282539	deletion	OSC2247	SNP array	Probe signal intensity	nssv18282834, nssv18282832, nssv18282833
nssv18282688	deletion	OSC2135	SNP array	Probe signal intensity	5
nssv18282752	deletion	OSC2176	SNP array	Probe signal intensity	9
nssv18282836	deletion	OSC2252	SNP array	Probe signal intensity	nssv18282835, nssv18282837, nssv18282838
nssv18284645	deletion	OSC2693	SNP array	Probe signal intensity	7
nssv18284669	deletion	OSC2717	SNP array	Probe signal intensity	6
nssv18284690	deletion	OSC2728	SNP array	Probe signal intensity	nssv18284687, nssv18284688, nssv18285399
nssv18285492	deletion	OSC2803	SNP array	Probe signal intensity	7
nssv18286743	deletion	OSC3035	SNP array	Probe signal intensity	nssv18287304
nssv18287260	deletion	OSC3005	SNP array	Probe signal intensity	nssv18286698, nssv18287261
nssv18289891	deletion	OSC3547	SNP array	Probe signal intensity	nssv18290197, nssv18290198
nssv18291382	deletion	OSC3731	SNP array	Probe signal intensity	nssv18291383, nssv18291384, nssv18291385
nssv18292861	deletion	OSC0421	SNP array	Probe signal intensity	5
nssv18293886	deletion	OSC4175	SNP array	Probe signal intensity	6
nssv18299363	deletion	OSC0543	SNP array	Probe signal intensity	5
nssv18300823	deletion	OSC0558	SNP array	Probe signal intensity	nssv18300827, nssv18300832
nssv18302467	deletion	OSC5793	SNP array	Probe signal intensity	7
nssv18304521	deletion	OSC6150	SNP array	Probe signal intensity	11
nssv18305365	deletion	OSC6340	SNP array	Probe signal intensity	11
nssv18308251	deletion	OSC0713	SNP array	Probe signal intensity	6
nssv18308368	deletion	OSC6894	SNP array	Probe signal intensity	12
nssv18317773	deletion	OSC8439	SNP array	Probe signal intensity	5
nssv18318949	deletion	OSC8628	SNP array	Probe signal intensity	9
nssv18319655	deletion	OSC8737	SNP array	Probe signal intensity	7
nssv18321826	deletion	OSC1217	SNP array	Probe signal intensity	9
nssv18322040	deletion	OSC1166	SNP array	Probe signal intensity	7
nssv18323438	deletion	OSC1494	SNP array	Probe signal intensity	7
nssv18323827	deletion	OSC1512	SNP array	Probe signal intensity	7
nssv18324468	deletion	OSC1572	SNP array	Probe signal intensity	7
nssv18324782	deletion	OSC1805	SNP array	Probe signal intensity	8
nssv18325037	deletion	OSC0204	SNP array	Probe signal intensity	5

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18281870	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18282539	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18282688	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18282752	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18282836	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18284645	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18284669	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18284690	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18285492	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18286743	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18287260	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18289891	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18291382	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18292861	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18293886	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18299363	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18300823	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18302467	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18304521	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18305365	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18308251	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18308368	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18317773	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18318949	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18319655	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18321826	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18322040	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18323438	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18323827	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18324468	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18324782	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18325037	Remapped	Perfect	NC_000001.11:g.(?_ 72546545)_(7262466 1_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	72,546,545	72,624,661
nssv18281870	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18282539	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18282688	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18282752	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18282836	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18284645	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18284669	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18284690	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18285492	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18286743	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18287260	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18289891	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18291382	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18292861	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18293886	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18299363	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18300823	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18302467	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18304521	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18305365	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18308251	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18308368	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18317773	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18318949	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18319655	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18321826	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18322040	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18323438	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18323827	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18324468	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18324782	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344
nssv18325037	Submitted genomic		NC_000001.10:g.(?_ 73012228)_(7309034 4_?)del	GRCh37 (hg19)		NC_000001.10	Chr1	73,012,228	73,090,344

dbVar

Database of genomic structural variation

nsv6626279

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant