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dbVar

Database of genomic structural variation

nsv6625471

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:69,025

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1354 SVs from 86 studies. See in: genome view

Remapped(Score: Perfect):103,542,120-103,611,144

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6625471	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	103,542,120	103,611,144
nsv6625471	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	104,084,742	104,153,766

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18304775	duplication	OSC6121	SNP array	Probe signal intensity	9
nssv18307953	duplication	OSC6847	SNP array	Probe signal intensity	17
nssv18309768	duplication	OSC7021	SNP array	Probe signal intensity	8
nssv18312590	duplication	OSC7728	SNP array	Probe signal intensity	11
nssv18313944	duplication	OSC8004	SNP array	Probe signal intensity	6
nssv18319010	duplication	OSC8672	SNP array	Probe signal intensity	13

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18304775	Remapped	Perfect	NC_000001.11:g.(?_ 103542120)_(103611 144_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	103,542,120	103,611,144
nssv18307953	Remapped	Perfect	NC_000001.11:g.(?_ 103542120)_(103611 144_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	103,542,120	103,611,144
nssv18309768	Remapped	Perfect	NC_000001.11:g.(?_ 103542120)_(103611 144_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	103,542,120	103,611,144
nssv18312590	Remapped	Perfect	NC_000001.11:g.(?_ 103542120)_(103611 144_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	103,542,120	103,611,144
nssv18313944	Remapped	Perfect	NC_000001.11:g.(?_ 103542120)_(103611 144_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	103,542,120	103,611,144
nssv18319010	Remapped	Perfect	NC_000001.11:g.(?_ 103542120)_(103611 144_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	103,542,120	103,611,144
nssv18304775	Submitted genomic		NC_000001.10:g.(?_ 104084742)_(104153 766_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	104,084,742	104,153,766
nssv18307953	Submitted genomic		NC_000001.10:g.(?_ 104084742)_(104153 766_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	104,084,742	104,153,766
nssv18309768	Submitted genomic		NC_000001.10:g.(?_ 104084742)_(104153 766_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	104,084,742	104,153,766
nssv18312590	Submitted genomic		NC_000001.10:g.(?_ 104084742)_(104153 766_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	104,084,742	104,153,766
nssv18313944	Submitted genomic		NC_000001.10:g.(?_ 104084742)_(104153 766_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	104,084,742	104,153,766
nssv18319010	Submitted genomic		NC_000001.10:g.(?_ 104084742)_(104153 766_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	104,084,742	104,153,766

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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