nsv6624289
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,406,597
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 5168 SVs from 105 studies. See in: genome view
Overlapping variant regions from other studies: 5171 SVs from 105 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6624289 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 5,045,049 | 6,451,645 |
| nsv6624289 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 4,948,344 | 6,354,965 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18301780 | duplication | OSC5735 | SNP array | Probe signal intensity | 9 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18301780 | Remapped | Good | NC_000017.11:g.(?_ 5045049)_(6451645_ ?)dup | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 5,045,049 | 6,451,645 |
| nssv18301780 | Submitted genomic | NC_000017.10:g.(?_ 4948344)_(6354965_ ?)dup | GRCh37 (hg19) | NC_000017.10 | Chr17 | 4,948,344 | 6,354,965 |