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dbVar

Database of genomic structural variation

nsv6623453

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:9
Validation:Not tested
Clinical Assertions: No
Region Size:103,339

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 3129 SVs from 95 studies. See in: genome view

Remapped(Score: Perfect):32,498,162-32,601,500

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623453	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nsv6623453	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	32,509,483	32,612,821

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18303414	duplication	OSC6010	SNP array	Probe signal intensity	11
nssv18316414	duplication	OSC8399	SNP array	Probe signal intensity	12
nssv18316674	duplication	OSC8327	SNP array	Probe signal intensity	10
nssv18317178	duplication	OSC8331	SNP array	Probe signal intensity	13
nssv18317993	duplication	OSC8403	SNP array	Probe signal intensity	7
nssv18319083	duplication	OSC8709	SNP array	Probe signal intensity	12
nssv18319236	duplication	OSC8641	SNP array	Probe signal intensity	12
nssv18319597	duplication	OSC8705	SNP array	Probe signal intensity	12
nssv18320219	duplication	OSC8854	SNP array	Probe signal intensity	11

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18303414	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18316414	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18316674	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18317178	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18317993	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18319083	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18319236	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18319597	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18320219	Remapped	Perfect	NC_000016.10:g.(?_ 32498162)_(3260150 0_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	32,498,162	32,601,500
nssv18303414	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821
nssv18316414	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821
nssv18316674	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821
nssv18317178	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821
nssv18317993	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821
nssv18319083	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821
nssv18319236	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821
nssv18319597	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821
nssv18320219	Submitted genomic		NC_000016.9:g.(?_3 2509483)_(32612821 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	32,509,483	32,612,821

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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