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dbVar

Database of genomic structural variation

nsv6623123

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:135,669

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 580 SVs from 59 studies. See in: genome view

Remapped(Score: Perfect):57,343,521-57,479,189

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623123	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	57,343,521	57,479,189
nsv6623123	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	57,635,719	57,771,387

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18315577	duplication	OSC0840	SNP array	Probe signal intensity	8
nssv18319914	duplication	OSC0942	SNP array	Probe signal intensity	6
nssv18320810	duplication	OSC0936	SNP array	Probe signal intensity	nssv18320809, nssv18320257, nssv18320811
nssv18324991	duplication	OSC0202	SNP array	Probe signal intensity	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18315577	Remapped	Perfect	NC_000015.10:g.(?_ 57343521)_(5747918 9_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	57,343,521	57,479,189
nssv18319914	Remapped	Perfect	NC_000015.10:g.(?_ 57343521)_(5747918 9_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	57,343,521	57,479,189
nssv18320810	Remapped	Perfect	NC_000015.10:g.(?_ 57343521)_(5747918 9_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	57,343,521	57,479,189
nssv18324991	Remapped	Perfect	NC_000015.10:g.(?_ 57343521)_(5747918 9_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	57,343,521	57,479,189
nssv18315577	Submitted genomic		NC_000015.9:g.(?_5 7635719)_(57771387 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	57,635,719	57,771,387
nssv18319914	Submitted genomic		NC_000015.9:g.(?_5 7635719)_(57771387 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	57,635,719	57,771,387
nssv18320810	Submitted genomic		NC_000015.9:g.(?_5 7635719)_(57771387 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	57,635,719	57,771,387
nssv18324991	Submitted genomic		NC_000015.9:g.(?_5 7635719)_(57771387 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	57,635,719	57,771,387

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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