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dbVar

Database of genomic structural variation

nsv6623114

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:114,431

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 787 SVs from 80 studies. See in: genome view

Remapped(Score: Perfect):43,632,222-43,746,652

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623114	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	43,632,222	43,746,652
nsv6623114	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	43,924,420	44,038,850

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18290887	deletion	OSC3591	SNP array	Probe signal intensity	8
nssv18300720	deletion	OSC5379	SNP array	Probe signal intensity	6
nssv18306917	deletion	OSC0678	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18290887	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4374665 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,746,652
nssv18300720	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4374665 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,746,652
nssv18306917	Remapped	Perfect	NC_000015.10:g.(?_ 43632222)_(4374665 2_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	43,632,222	43,746,652
nssv18290887	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(44038850 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	44,038,850
nssv18300720	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(44038850 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	44,038,850
nssv18306917	Submitted genomic		NC_000015.9:g.(?_4 3924420)_(44038850 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	43,924,420	44,038,850

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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