nsv6623081

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:18
Validation:Not tested
Clinical Assertions: No
Region Size:206,927

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 2345 SVs from 109 studies. See in: genome view

Remapped(Score: Perfect):34,468,447-34,675,373

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623081	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nsv6623081	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	34,760,648	34,967,574

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18284059	deletion	OSC2450	SNP array	Probe signal intensity	nssv18284060, nssv18284058
nssv18286255	deletion	OSC2688	SNP array	Probe signal intensity	8
nssv18288747	deletion	OSC0326	SNP array	Probe signal intensity	nssv18287870, nssv18288428, nssv18288752
nssv18292221	deletion	OSC3886	SNP array	Probe signal intensity	7
nssv18294329	deletion	OSC0447	SNP array	Probe signal intensity	8
nssv18295089	deletion	OSC4387	SNP array	Probe signal intensity	6
nssv18295654	deletion	OSC4606	SNP array	Probe signal intensity	5
nssv18296210	deletion	OSC4529	SNP array	Probe signal intensity	8
nssv18297463	deletion	OSC4768	SNP array	Probe signal intensity	5
nssv18308726	deletion	OSC0722	SNP array	Probe signal intensity	7
nssv18314508	deletion	OSC0828	SNP array	Probe signal intensity	7
nssv18314538	deletion	OSC0831	SNP array	Probe signal intensity	8
nssv18317496	deletion	OSC0889	SNP array	Probe signal intensity	6
nssv18321731	deletion	OSC1160	SNP array	Probe signal intensity	6
nssv18321920	deletion	OSC1278	SNP array	Probe signal intensity	6
nssv18322249	deletion	OSC1325	SNP array	Probe signal intensity	6
nssv18322262	deletion	OSC1332	SNP array	Probe signal intensity	nssv18322263
nssv18323978	deletion	OSC1629	SNP array	Probe signal intensity	8

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18284059	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18286255	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18288747	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18292221	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18294329	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18295089	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18295654	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18296210	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18297463	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18308726	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18314508	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18314538	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18317496	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18321731	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18321920	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18322249	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18322262	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18323978	Remapped	Perfect	NC_000015.10:g.(?_ 34468447)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,468,447	34,675,373
nssv18284059	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18286255	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18288747	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18292221	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18294329	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18295089	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18295654	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18296210	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18297463	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18308726	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18314508	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18314538	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18317496	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18321731	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18321920	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18322249	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18322262	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574
nssv18323978	Submitted genomic		NC_000015.9:g.(?_3 4760648)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,760,648	34,967,574

dbVar

Database of genomic structural variation

nsv6623081

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant