nsv6622990
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:77,060
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1766 SVs from 95 studies. See in: genome view
Overlapping variant regions from other studies: 1766 SVs from 95 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6622990 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 24,218,954 | 24,296,013 |
| nsv6622990 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 24,464,101 | 24,541,160 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18299222 | duplication | OSC5191 | SNP array | Probe signal intensity | nssv18298985, nssv18299221, nssv18299561 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18299222 | Remapped | Perfect | NC_000015.10:g.(?_ 24218954)_(2429601 3_?)dup | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 24,218,954 | 24,296,013 |
| nssv18299222 | Submitted genomic | NC_000015.9:g.(?_2 4464101)_(24541160 _?)dup | GRCh37 (hg19) | NC_000015.9 | Chr15 | 24,464,101 | 24,541,160 |