nsv6622889

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:35
Validation:Not tested
Clinical Assertions: No
Region Size:37,620

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 447 SVs from 73 studies. See in: genome view

Remapped(Score: Perfect):34,637,754-34,675,373

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6622889	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nsv6622889	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	34,929,955	34,967,574

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18282985	deletion	OSC2346	SNP array	Probe signal intensity	5
nssv18283219	deletion	OSC0237	SNP array	Probe signal intensity	7
nssv18283647	deletion	OSC2372	SNP array	Probe signal intensity	6
nssv18283707	deletion	OSC2423	SNP array	Probe signal intensity	nssv18283090, nssv18283706, nssv18284018
nssv18284689	deletion	OSC0283	SNP array	Probe signal intensity	5
nssv18284811	deletion	OSC2553	SNP array	Probe signal intensity	7
nssv18285179	deletion	OSC2575	SNP array	Probe signal intensity	nssv18284837, nssv18285177, nssv18285178
nssv18285526	deletion	OSC2826	SNP array	Probe signal intensity	5
nssv18286824	deletion	OSC3087	SNP array	Probe signal intensity	nssv18287709, nssv18287710, nssv18287711
nssv18287051	deletion	OSC3091	SNP array	Probe signal intensity	nssv18286834, nssv18287052, nssv18287401
nssv18287237	deletion	OSC2990	SNP array	Probe signal intensity	8
nssv18287510	deletion	OSC2940	SNP array	Probe signal intensity	nssv18286608, nssv18286609, nssv18287184
nssv18287739	deletion	OSC3106	SNP array	Probe signal intensity	10
nssv18289048	deletion	OSC0349	SNP array	Probe signal intensity	5
nssv18289068	deletion	OSC3363	SNP array	Probe signal intensity	10
nssv18289600	deletion	OSC0371	SNP array	Probe signal intensity	nssv18289601, nssv18291172
nssv18290948	deletion	OSC3631	SNP array	Probe signal intensity	8
nssv18291229	deletion	OSC0374	SNP array	Probe signal intensity	6
nssv18291755	deletion	OSC3961	SNP array	Probe signal intensity	7
nssv18292369	deletion	OSC3984	SNP array	Probe signal intensity	5
nssv18292401	deletion	OSC0390	SNP array	Probe signal intensity	6
nssv18292495	deletion	OSC3850	SNP array	Probe signal intensity	5
nssv18292561	deletion	OSC0400	SNP array	Probe signal intensity	5
nssv18293001	deletion	OSC4188	SNP array	Probe signal intensity	5
nssv18293052	deletion	OSC4070	SNP array	Probe signal intensity	5
nssv18293683	deletion	OSC4034	SNP array	Probe signal intensity	nssv18292782, nssv18292783, nssv18293364
nssv18294789	deletion	OSC4414	SNP array	Probe signal intensity	6
nssv18295030	deletion	OSC0449	SNP array	Probe signal intensity	5
nssv18295476	deletion	OSC4644	SNP array	Probe signal intensity	nssv18296022
nssv18296085	deletion	OSC4695	SNP array	Probe signal intensity	9
nssv18311335	deletion	OSC0785	SNP array	Probe signal intensity	9
nssv18323760	deletion	OSC1736	SNP array	Probe signal intensity	7
nssv18324562	deletion	OSC1641	SNP array	Probe signal intensity	6
nssv18324890	deletion	OSC1872	SNP array	Probe signal intensity	5
nssv18325624	deletion	OSC1930	SNP array	Probe signal intensity	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18282985	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18283219	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18283647	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18283707	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18284689	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18284811	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18285179	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18285526	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18286824	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18287051	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18287237	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18287510	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18287739	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18289048	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18289068	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18289600	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18290948	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18291229	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18291755	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18292369	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18292401	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18292495	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18292561	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18293001	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18293052	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18293683	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18294789	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18295030	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18295476	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18296085	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18311335	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18323760	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18324562	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18324890	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18325624	Remapped	Perfect	NC_000015.10:g.(?_ 34637754)_(3467537 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	34,637,754	34,675,373
nssv18282985	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18283219	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18283647	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18283707	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18284689	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18284811	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18285179	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18285526	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18286824	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18287051	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18287237	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18287510	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18287739	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18289048	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18289068	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18289600	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18290948	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18291229	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18291755	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18292369	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18292401	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18292495	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18292561	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18293001	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18293052	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18293683	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18294789	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18295030	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18295476	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18296085	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18311335	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18323760	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18324562	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18324890	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574
nssv18325624	Submitted genomic		NC_000015.9:g.(?_3 4929955)_(34967574 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	34,929,955	34,967,574

dbVar

Database of genomic structural variation

nsv6622889

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant