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dbVar

Database of genomic structural variation

nsv6621948

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:31,227

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 280 SVs from 53 studies. See in: genome view

Remapped(Score: Perfect):62,819,135-62,850,361

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6621948	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000013.11	Chr13	62,819,135	62,850,361
nsv6621948	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000013.10	Chr13	63,393,268	63,424,494

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18287413	deletion	OSC0318	SNP array	Probe signal intensity	6
nssv18294998	deletion	OSC4313	SNP array	Probe signal intensity	10

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18287413	Remapped	Perfect	NC_000013.11:g.(?_ 62819135)_(6285036 1_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	62,819,135	62,850,361
nssv18294998	Remapped	Perfect	NC_000013.11:g.(?_ 62819135)_(6285036 1_?)del	GRCh38.p12	First Pass	NC_000013.11	Chr13	62,819,135	62,850,361
nssv18287413	Submitted genomic		NC_000013.10:g.(?_ 63393268)_(6342449 4_?)del	GRCh37 (hg19)		NC_000013.10	Chr13	63,393,268	63,424,494
nssv18294998	Submitted genomic		NC_000013.10:g.(?_ 63393268)_(6342449 4_?)del	GRCh37 (hg19)		NC_000013.10	Chr13	63,393,268	63,424,494

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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