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dbVar

Database of genomic structural variation

nsv6621762

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:37,727

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 178 SVs from 40 studies. See in: genome view

Remapped(Score: Perfect):97,623,103-97,660,829

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6621762	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000012.12	Chr12	97,623,103	97,660,829
nsv6621762	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000012.11	Chr12	98,016,881	98,054,607

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18284098	deletion	OSC2478	SNP array	Probe signal intensity	nssv18285027, nssv18285028, nssv18284703
nssv18286252	deletion	OSC0280	SNP array	Probe signal intensity	nssv18285325, nssv18285335, nssv18285944
nssv18291586	deletion	OSC0395	SNP array	Probe signal intensity	nssv18292167, nssv18292171, nssv18292481
nssv18293138	deletion	OSC4122	SNP array	Probe signal intensity	7

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18284098	Remapped	Perfect	NC_000012.12:g.(?_ 97623103)_(9766082 9_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	97,623,103	97,660,829
nssv18286252	Remapped	Perfect	NC_000012.12:g.(?_ 97623103)_(9766082 9_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	97,623,103	97,660,829
nssv18291586	Remapped	Perfect	NC_000012.12:g.(?_ 97623103)_(9766082 9_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	97,623,103	97,660,829
nssv18293138	Remapped	Perfect	NC_000012.12:g.(?_ 97623103)_(9766082 9_?)del	GRCh38.p12	First Pass	NC_000012.12	Chr12	97,623,103	97,660,829
nssv18284098	Submitted genomic		NC_000012.11:g.(?_ 98016881)_(9805460 7_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	98,016,881	98,054,607
nssv18286252	Submitted genomic		NC_000012.11:g.(?_ 98016881)_(9805460 7_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	98,016,881	98,054,607
nssv18291586	Submitted genomic		NC_000012.11:g.(?_ 98016881)_(9805460 7_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	98,016,881	98,054,607
nssv18293138	Submitted genomic		NC_000012.11:g.(?_ 98016881)_(9805460 7_?)del	GRCh37 (hg19)		NC_000012.11	Chr12	98,016,881	98,054,607

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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