nsv6621285
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:21
- Validation:Not tested
- Clinical Assertions: No
- Region Size:52,846
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 239 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 239 SVs from 36 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6621285 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nsv6621285 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18281757 | duplication | OSC2130 | SNP array | Probe signal intensity | 8 |
| nssv18282223 | duplication | OSC2253 | SNP array | Probe signal intensity | nssv18283469, nssv18282839, nssv18282224 |
| nssv18282240 | duplication | OSC2029 | SNP array | Probe signal intensity | 9 |
| nssv18283888 | duplication | OSC2339 | SNP array | Probe signal intensity | 7 |
| nssv18283977 | duplication | OSC2401 | SNP array | Probe signal intensity | 8 |
| nssv18284829 | duplication | OSC2568 | SNP array | Probe signal intensity | 8 |
| nssv18284989 | duplication | OSC2671 | SNP array | Probe signal intensity | 9 |
| nssv18285332 | duplication | OSC2686 | SNP array | Probe signal intensity | 9 |
| nssv18289207 | duplication | OSC3464 | SNP array | Probe signal intensity | 5 |
| nssv18289818 | duplication | OSC3492 | SNP array | Probe signal intensity | 6 |
| nssv18292080 | duplication | OSC4029 | SNP array | Probe signal intensity | 5 |
| nssv18292314 | duplication | OSC3948 | SNP array | Probe signal intensity | 8 |
| nssv18292406 | duplication | OSC0391 | SNP array | Probe signal intensity | nssv18292093, nssv18291508, nssv18291503 |
| nssv18295887 | duplication | OSC4541 | SNP array | Probe signal intensity | 6 |
| nssv18320314 | duplication | OSC0971 | SNP array | Probe signal intensity | 8 |
| nssv18321548 | duplication | OSC1210 | SNP array | Probe signal intensity | 10 |
| nssv18321586 | duplication | OSC1237 | SNP array | Probe signal intensity | 7 |
| nssv18321710 | duplication | OSC0113 | SNP array | Probe signal intensity | 9 |
| nssv18323987 | duplication | OSC1634 | SNP array | Probe signal intensity | nssv18323988, nssv18324552, nssv18324551 |
| nssv18324534 | duplication | OSC1623 | SNP array | Probe signal intensity | 8 |
| nssv18324757 | duplication | OSC1788 | SNP array | Probe signal intensity | 7 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18281757 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18282223 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18282240 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18283888 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18283977 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18284829 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18284989 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18285332 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18289207 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18289818 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18292080 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18292314 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18292406 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18295887 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18320314 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18321548 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18321586 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18321710 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18323987 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18324534 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18324757 | Remapped | Perfect | NC_000011.10:g.(?_ 95835367)_(9588821 2_?)dup | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 95,835,367 | 95,888,212 |
| nssv18281757 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18282223 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18282240 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18283888 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18283977 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18284829 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18284989 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18285332 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18289207 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18289818 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18292080 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18292314 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18292406 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18295887 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18320314 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18321548 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18321586 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18321710 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18323987 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18324534 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 | ||
| nssv18324757 | Submitted genomic | NC_000011.9:g.(?_9 5568531)_(95621376 _?)dup | GRCh37 (hg19) | NC_000011.9 | Chr11 | 95,568,531 | 95,621,376 |