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dbVar

Database of genomic structural variation

nsv6620185

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:17,291

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 554 SVs from 60 studies. See in: genome view

Remapped(Score: Perfect):133,201,591-133,218,881

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6620185	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	133,201,591	133,218,881
nsv6620185	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000010.10	Chr10	135,015,095	135,032,385

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18281646	duplication	OSC2048	SNP array	Probe signal intensity	5
nssv18285598	deletion	OSC2878	SNP array	Probe signal intensity	10
nssv18286357	duplication	OSC2769	SNP array	Probe signal intensity	nssv18286041, nssv18285443, nssv18285444
nssv18286540	duplication	OSC2904	SNP array	Probe signal intensity	5

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18281646	Remapped	Perfect	NC_000010.11:g.(?_ 133201591)_(133218 881_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	133,201,591	133,218,881
nssv18285598	Remapped	Perfect	NC_000010.11:g.(?_ 133201591)_(133218 881_?)del	GRCh38.p12	First Pass	NC_000010.11	Chr10	133,201,591	133,218,881
nssv18286357	Remapped	Perfect	NC_000010.11:g.(?_ 133201591)_(133218 881_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	133,201,591	133,218,881
nssv18286540	Remapped	Perfect	NC_000010.11:g.(?_ 133201591)_(133218 881_?)dup	GRCh38.p12	First Pass	NC_000010.11	Chr10	133,201,591	133,218,881
nssv18281646	Submitted genomic		NC_000010.10:g.(?_ 135015095)_(135032 385_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	135,015,095	135,032,385
nssv18285598	Submitted genomic		NC_000010.10:g.(?_ 135015095)_(135032 385_?)del	GRCh37 (hg19)		NC_000010.10	Chr10	135,015,095	135,032,385
nssv18286357	Submitted genomic		NC_000010.10:g.(?_ 135015095)_(135032 385_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	135,015,095	135,032,385
nssv18286540	Submitted genomic		NC_000010.10:g.(?_ 135015095)_(135032 385_?)dup	GRCh37 (hg19)		NC_000010.10	Chr10	135,015,095	135,032,385

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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