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dbVar

Database of genomic structural variation

nsv6584509

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,367

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 103 SVs from 17 studies. See in: genome view

Submitted genomic117,856,557-117,860,923

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6584509	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	117,856,557	117,860,923
nsv6584509	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	117,727,272	117,731,638

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18230551	inversion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18230551	Submitted genomic		NC_000011.10:g.117 856557_117860923in v	GRCh38 (hg38)		NC_000011.10	Chr11	117,856,557	117,860,923
nssv18230551	Remapped	Perfect	NC_000011.9:g.1177 27272_117731638inv	GRCh37.p13	First Pass	NC_000011.9	Chr11	117,727,272	117,731,638

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18230551	<0.001	1	39304

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