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dbVar

Database of genomic structural variation

nsv6556222

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:7,266,852

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 18709 SVs from 125 studies. See in: genome view

Submitted genomic108,711,905-115,978,756

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6556222	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	108,711,905	115,978,756
nsv6556222	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	109,633,061	116,899,912

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18262967	inversion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18262967	Submitted genomic		NC_000004.12:g.108 711905_115978756in v	GRCh38 (hg38)		NC_000004.12	Chr4	108,711,905	115,978,756
nssv18262967	Remapped	Perfect	NC_000004.11:g.109 633061_116899912in v	GRCh37.p13	First Pass	NC_000004.11	Chr4	109,633,061	116,899,912

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18262967	<0.001	1	39304

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