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dbVar

Database of genomic structural variation

nsv6368382

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:316,200

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1040 SVs from 75 studies. See in: genome view

Submitted genomic98,494,301-98,810,500

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6368382	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	98,494,301	98,810,500
nsv6368382	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	98,213,145	98,529,344

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18211291	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18211291	Submitted genomic		NC_000003.12:g.984 94301_98810500dup	GRCh38 (hg38)		NC_000003.12	Chr3	98,494,301	98,810,500
nssv18211291	Remapped	Perfect	NC_000003.11:g.982 13145_98529344dup	GRCh37.p13	First Pass	NC_000003.11	Chr3	98,213,145	98,529,344

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18211291	<0.001	6	23146

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