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dbVar

Database of genomic structural variation

nsv6331508

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:41,013

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 266 SVs from 31 studies. See in: genome view

Submitted genomic42,967,587-43,008,599

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6331508	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	42,967,587	43,008,599
nsv6331508	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	43,433,258	43,474,270

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18203132	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18203132	Submitted genomic		NC_000001.11:g.429 67587_43008599dup	GRCh38 (hg38)		NC_000001.11	Chr1	42,967,587	43,008,599
nssv18203132	Remapped	Perfect	NC_000001.10:g.434 33258_43474270dup	GRCh37.p13	First Pass	NC_000001.10	Chr1	43,433,258	43,474,270

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18203132	<0.001	1	39304

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