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dbVar

Database of genomic structural variation

nsv6328640

Organism: Homo sapiens

Study:nstd223 (Sedlazeck et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,191

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 110 SVs from 31 studies. See in: genome view

Submitted genomic23,765,143-23,767,333

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6328640	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	23,765,143	23,767,333
nsv6328640	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	24,091,633	24,093,823

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18202495	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18202495	Submitted genomic		NC_000001.11:g.237 65143_23767333dup	GRCh38 (hg38)		NC_000001.11	Chr1	23,765,143	23,767,333
nssv18202495	Remapped	Perfect	NC_000001.10:g.240 91633_24093823dup	GRCh37.p13	First Pass	NC_000001.10	Chr1	24,091,633	24,093,823

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18202495	<0.001	1	38458

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