nsv6290834
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:32,440,929
- Description:GRCh37/hg19 11q14.1-23.3(chr11:85422071-118022671)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 83461 SVs from 140 studies. See in: genome view
Overlapping variant regions from other studies: 83398 SVs from 140 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6290834 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 85,711,028 | 118,151,956 |
| nsv6290834 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 85,422,071 | 118,022,671 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv17956131 | copy number loss | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001832892.1, VCV001340004.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17956131 | Remapped | Good | NC_000011.10:g.(?_ 85711028)_(1181519 56_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 85,711,028 | 118,151,956 |
| nssv17956131 | Submitted genomic | NC_000011.9:g.(?_8 5422071)_(11802267 1_?)del | GRCh37 (hg19) | NC_000011.9 | Chr11 | 85,422,071 | 118,022,671 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv17956131 | GRCh37: NC_000011.9:g.(?_85422071)_(118022671_?)del | copy number loss | germline | not provided | Uncertain significance | ClinVar | RCV001832892.1, VCV001340004.1 | 1 |