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dbVar

Database of genomic structural variation

nsv6135570

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:360,002

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1948 SVs from 109 studies. See in: genome view

Remapped(Score: Perfect):143,872,907-144,232,908

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6135570	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	143,872,907	144,232,908
nsv6135570	Remapped	Pass	GRCh38.p12	PATCHES	Second Pass	NW_018654715.1	Chr7\|NW_01 8654715.1	1	187,502
nsv6135570	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	143,570,000	143,930,001

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17681260	copy number gain	SAMN20524657	Sequencing	Paired-end mapping	656

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17681260	Remapped	Pass	NW_018654715.1:g.1 _187502dup	GRCh38.p12	Second Pass	NW_018654715.1	Chr7\|NW_01 8654715.1	1	187,502
nssv17681260	Remapped	Perfect	NC_000007.14:g.143 872907_144232908du p	GRCh38.p12	First Pass	NC_000007.14	Chr7	143,872,907	144,232,908
nssv17681260	Submitted genomic		NC_000007.13:g.143 570000_143930001du p	GRCh37 (hg19)		NC_000007.13	Chr7	143,570,000	143,930,001

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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