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dbVar

Database of genomic structural variation

nsv6134557

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:107,112

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 401 SVs from 57 studies. See in: genome view

Remapped(Score: Perfect):173,743,120-173,850,231

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6134557	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	173,743,120	173,743,122	173,850,229	173,850,231
nsv6134557	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	173,460,910	173,460,912	173,568,019	173,568,021

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17683395	deletion	SAMN20524661	Sequencing	Paired-end mapping	62

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17683395	Remapped	Perfect	NC_000003.12:g.(17 3743120_173743122) _(173850229_173850 231)del	GRCh38.p12	First Pass	NC_000003.12	Chr3	173,743,120	173,743,122	173,850,229	173,850,231
nssv17683395	Submitted genomic		NC_000003.11:g.(17 3460910_173460912) _(173568019_173568 021)del	GRCh37 (hg19)		NC_000003.11	Chr3	173,460,910	173,460,912	173,568,019	173,568,021

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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