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dbVar

Database of genomic structural variation

nsv6134382

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:38,508

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 137 SVs from 34 studies. See in: genome view

Remapped(Score: Perfect):56,090,869-56,129,376

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6134382	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	56,090,869	56,090,870	56,129,375	56,129,376
nsv6134382	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	56,124,897	56,124,898	56,163,403	56,163,404

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17682710	deletion	SAMN20524659	Sequencing	Paired-end mapping	203

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17682710	Remapped	Perfect	NC_000003.12:g.(56 090869_56090870)_( 56129375_56129376) del	GRCh38.p12	First Pass	NC_000003.12	Chr3	56,090,869	56,090,870	56,129,375	56,129,376
nssv17682710	Submitted genomic		NC_000003.11:g.(56 124897_56124898)_( 56163403_56163404) del	GRCh37 (hg19)		NC_000003.11	Chr3	56,124,897	56,124,898	56,163,403	56,163,404

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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