nsv6131924
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:237,382
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 740 SVs from 58 studies. See in: genome view
Overlapping variant regions from other studies: 740 SVs from 58 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv6131924 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 102,497,759 | 102,497,763 | 102,735,139 | 102,735,140 |
| nsv6131924 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 104,257,516 | 104,257,520 | 104,494,896 | 104,494,897 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17680357 | deletion | SAMN20524659 | Sequencing | Paired-end mapping | 203 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv17680357 | Remapped | Perfect | NC_000010.11:g.(10 2497759_102497763) _(102735139_102735 140)del | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 102,497,759 | 102,497,763 | 102,735,139 | 102,735,140 |
| nssv17680357 | Submitted genomic | NC_000010.10:g.(10 4257516_104257520) _(104494896_104494 897)del | GRCh37 (hg19) | NC_000010.10 | Chr10 | 104,257,516 | 104,257,520 | 104,494,896 | 104,494,897 |