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dbVar

Database of genomic structural variation

nsv5873347

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:360

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 130 SVs from 24 studies. See in: genome view

Submitted genomic87,148,645-87,149,004

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5873347	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	87,148,645	87,149,004
nsv5873347	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	87,614,328	87,614,687

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17398780	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17398780	Submitted genomic		NC_000001.11:g.871 48645_87149004del	GRCh38 (hg38)		NC_000001.11	Chr1	87,148,645	87,149,004
nssv17398780	Remapped	Perfect	NC_000001.10:g.876 14328_87614687del	GRCh37.p13	First Pass	NC_000001.10	Chr1	87,614,328	87,614,687

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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