nsv5665177
- Organism: Homo sapiens
- Study:nstd207 (Ebert et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,295
- Publication(s):Ebert et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 413 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 414 SVs from 32 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5665177 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000024.10 | ChrY | 21,539,859 | 21,553,153 | ||
| nsv5665177 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000024.9 | ChrY | 23,701,745 | 23,715,039 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17170413 | deletion | SAMN00004622 | Sequencing | Sequence alignment | 1,208 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17170413 | Submitted genomic | NC_000024.10:g.215 39859_21553153delC | GRCh38 (hg38) | NC_000024.10 | ChrY | 21,539,859 | 21,553,153 | ||
| nssv17170413 | Remapped | Perfect | NC_000024.9:g.2370 1745_23715039delC | GRCh37.p13 | First Pass | NC_000024.9 | ChrY | 23,701,745 | 23,715,039 |