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nsv5310116

  • Variant Calls:1
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:116

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 137 SVs from 22 studies. See in: genome view    
Submitted genomic56,492,813-56,492,933Question Mark
Overlapping variant regions from other studies: 137 SVs from 22 studies. See in: genome view    
Remapped(Score: Perfect):57,405,372-57,405,492Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrStartStop
nsv5310116Submitted genomicGRCh38.p13Primary AssemblyNC_000008.11Chr856,492,816 (-3, +2)56,492,931 (-3, +2)
nsv5310116RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000008.10Chr857,405,375 (-3, +2)57,405,490 (-3, +2)

Variant Call Information

Variant Call IDTypeMethodAnalysis
nssv16745657deletionSequencingSplit read and paired-end mapping

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrStartStop
nssv16745657Submitted genomicNC_000008.11:g.(56
492813_56492818)_(
56492928_56492933)
del
GRCh38.p13NC_000008.11Chr856,492,816 (-3, +2)56,492,931 (-3, +2)
nssv16745657RemappedPerfectNC_000008.10:g.(57
405372_57405377)_(
57405487_57405492)
del
GRCh37.p13First PassNC_000008.10Chr857,405,375 (-3, +2)57,405,490 (-3, +2)

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call IDAllele Frequency (AF)
nssv16745657<0.001
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