nsv5293732
- Organism: Homo sapiens
- Study:nstd204 (Chen et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:133,800
- Publication(s):Chen et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 442 SVs from 64 studies. See in: genome view
Overlapping variant regions from other studies: 430 SVs from 64 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 34 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5293732 | Submitted genomic | GRCh38.p13 | Primary Assembly | NC_000019.10 | Chr19 | 41,614,001 | 41,747,800 | ||
| nsv5293732 | Remapped | Good | GRCh37.p13 | Primary Assembly | Second Pass | NC_000019.9 | Chr19 | 42,120,357 | 42,251,720 |
| nsv5293732 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_004775434.1 | Chr19|NW_0 04775434.1 | 183,040 | 316,839 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16832284 | copy number variation | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv16832284 | Submitted genomic | GRCh38.p13 | NC_000019.10 | Chr19 | 41,614,001 | 41,747,800 | ||
| nssv16832284 | Remapped | Perfect | GRCh37.p13 | First Pass | NW_004775434.1 | Chr19|NW_0 04775434.1 | 183,040 | 316,839 |
| nssv16832284 | Remapped | Good | GRCh37.p13 | Second Pass | NC_000019.9 | Chr19 | 42,120,357 | 42,251,720 |