nsv4587014
- Organism: Homo sapiens
- Study:nstd183 (DECIPHER Consensus CNVs)
- Variant Type:copy number variation
- Method Type:Curated
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:81,291
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 255 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 112 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 255 SVs from 53 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4587014 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 112,132,970 | 112,204,812 |
| nsv4587014 | Remapped | Pass | GRCh38.p12 | PATCHES | Second Pass | NW_019805492.1 | Chr3|NW_01 9805492.1 | 16,260 | 97,550 |
| nsv4587014 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 111,851,817 | 111,923,659 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16092603 | duplication | Curated | Curated |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16092603 | Remapped | Pass | NW_019805492.1:g.( ?_16260)_(97550_?) dup | GRCh38.p12 | Second Pass | NW_019805492.1 | Chr3|NW_01 9805492.1 | 16,260 | 97,550 |
| nssv16092603 | Remapped | Perfect | NC_000003.12:g.(?_ 112132970)_(112204 812_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 112,132,970 | 112,204,812 |
| nssv16092603 | Submitted genomic | NC_000003.11:g.(?_ 111851817)_(111923 659_?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 111,851,817 | 111,923,659 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16092603 | <0.001 | 1 | 5919 |