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dbVar

Database of genomic structural variation

nsv4457860

Organism: Homo sapiens

Study:nstd102 (Clinical Structural Variants)
Variant Type:copy number variation
Method Type:Multiple
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: Yes
Region Size:50,212

Description:GRCh37/hg19 17q25.1(chr17:74523892-74574103)x1 AND not provided

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 255 SVs from 38 studies. See in: genome view

Remapped(Score: Perfect):76,527,810-76,578,021

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv4457860	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	76,527,810	76,578,021
nsv4457860	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000017.10	Chr17	74,523,892	74,574,103

Variant Call Information

Variant Call ID	Type	Method	Analysis	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15776293	copy number loss	Multiple	Multiple	not provided	Uncertain significance	ClinVar	RCV000849026.2, VCV000688335.2	1

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv15776293	Remapped	Perfect	NC_000017.11:g.(?_ 76527810)_(7657802 1_?)del	GRCh38.p12	First Pass	NC_000017.11	Chr17	76,527,810	76,578,021
nssv15776293	Submitted genomic		NC_000017.10:g.(?_ 74523892)_(7457410 3_?)del	GRCh37 (hg19)		NC_000017.10	Chr17	74,523,892	74,574,103

No validation data were submitted for this variant

Clinical Assertions

Variant Call ID	HGVS	Type	Allele Origin	Subject Phenotype	Clinical Interpretation	Source of Interpretation	ClinVar ID	Copy number
nssv15776293	GRCh37: NC_000017.10:g.(?_74523892)_(74574103_?)del	copy number loss	unknown	not provided	Uncertain significance	ClinVar	RCV000849026.2, VCV000688335.2	1

No genotype data were submitted for this variant

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