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dbVar

Database of genomic structural variation

nsv4449721

Organism: Homo sapiens

Study:nstd177 (Louzada et al. 2020)
Variant Type:copy number variation
Method Type:PCR
Submitted on:GRCh37 (hg19)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:224,168

Publication(s):Louzada et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1378 SVs from 94 studies. See in: genome view

Remapped(Score: Perfect):143,858,892-144,083,059

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv4449721	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	143,858,892	143,858,984	144,082,967	144,083,059
nsv4449721	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	144,780,045	144,780,137	145,004,120	145,004,212

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis
nssv15768584	deletion	SAMN01761532	PCR	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv15768584	Remapped	Perfect	NC_000004.12:g.(14 3858892_143858984) _(144082967_144083 059)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	143,858,892	143,858,984	144,082,967	144,083,059
nssv15768584	Submitted genomic		NC_000004.11:g.(14 4780045_144780137) _(145004120_145004 212)del	GRCh37 (hg19)		NC_000004.11	Chr4	144,780,045	144,780,137	145,004,120	145,004,212

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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