nsv3901021
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:188,693
- Description:GRCh37/hg19 17q21.32(chr17:46788433-46977125)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 761 SVs from 61 studies. See in: genome view
Overlapping variant regions from other studies: 761 SVs from 61 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3901021 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 48,711,071 | 48,899,763 |
| nsv3901021 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 46,788,433 | 46,977,125 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15159176 | copy number gain | Multiple | Multiple | not provided | Benign | ClinVar | RCV000739611.2, VCV000602975.2 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15159176 | Remapped | Perfect | NC_000017.11:g.(?_ 48711071)_(4889976 3_?)dup | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 48,711,071 | 48,899,763 |
| nssv15159176 | Submitted genomic | NC_000017.10:g.(?_ 46788433)_(4697712 5_?)dup | GRCh37 (hg19) | NC_000017.10 | Chr17 | 46,788,433 | 46,977,125 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15159176 | GRCh37: NC_000017.10:g.(?_46788433)_(46977125_?)dup | copy number gain | unknown | not provided | Benign | ClinVar | RCV000739611.2, VCV000602975.2 | 3 |