nsv3169255
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:17,227,224
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 47778 SVs from 134 studies. See in: genome view
Overlapping variant regions from other studies: 47699 SVs from 134 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3169255 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 6,546,755 (-168, +168) | 23,773,978 (-168, +168) |
| nsv3169255 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 6,588,717 (-168, +168) | 24,062,907 (-168, +168) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14239286 | deletion | DB109 | Sequencing | Paired-end mapping | 13 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14239286 | Remapped | Good | NC_000010.11:g.(65 46587_6546923)_(23 773810_23774146)de l | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 6,546,755 (-168, +168) | 23,773,978 (-168, +168) |
| nssv14239286 | Submitted genomic | NC_000010.10:g.(65 88549_6588885)_(24 062739_24063075)de l | GRCh37 (hg19) | NC_000010.10 | Chr10 | 6,588,717 (-168, +168) | 24,062,907 (-168, +168) |