nsv3169084
- Organism: Homo sapiens
- Study:nstd158 (Cleal et al. 2019)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:40,949,450
- Publication(s):Cleal et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 105915 SVs from 139 studies. See in: genome view
Overlapping variant regions from other studies: 104885 SVs from 139 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3169084 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 25,108,839 (-446, +446) | 66,058,288 (-446, +446) |
| nsv3169084 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 25,261,773 (-446, +446) | 66,452,068 (-446, +446) |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv14239852 | inversion | DB39 | Sequencing | Paired-end mapping | 16 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv14239852 | Remapped | Good | NC_000012.12:g.(25 108393_25109285)_( 66057842_66058734) inv158 | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 25,108,839 (-446, +446) | 66,058,288 (-446, +446) |
| nssv14239852 | Submitted genomic | NC_000012.11:g.(25 261327_25262219)_( 66451622_66452514) inv158 | GRCh37 (hg19) | NC_000012.11 | Chr12 | 25,261,773 (-446, +446) | 66,452,068 (-446, +446) |