Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv2789961

Organism: Homo sapiens

Study:nstd137 (Huddleston et al. 2016)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38 (hg38)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:21,678

Publication(s):Huddleston et al. 2016

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 330 SVs from 69 studies. See in: genome view

Submitted genomic1,894,049-1,915,726

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv2789961	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	1,894,049	1,915,726
nsv2789961	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv13686806	deletion	Sequencing	Genotyping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv13686806	Submitted genomic		NC_000011.10:g.189 4049_1915726del216 78	GRCh38 (hg38)		NC_000011.10	Chr11	1,894,049	1,915,726
nssv13686806	Remapped	Perfect	NC_000011.9:g.1915 279_1936956del2167 8	GRCh37.p13	First Pass	NC_000011.9	Chr11	1,915,279	1,936,956

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv13686806	1	64	64

You are here: NCBI