esv3817858
- Organism: Homo sapiens
- Study:estd214 (1000 Genomes Consortium Phase 3)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):1000 Genomes Project Consortium et al. 2015
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 411 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 408 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3817858 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 118,625,013 | 118,625,013 |
| esv3817858 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 117,758,976 | 117,758,976 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Zygosity | Other Calls in this Sample and Study |
|---|---|---|---|---|---|---|
| essv16931138 | mobile element insertion | SAMN00000925 | Sequencing | Read depth and paired-end mapping | Heterozygous | 2,725 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv16931138 | Remapped | Perfect | NC_000023.11:g.118 625013_118625014in s? | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 118,625,013 | 118,625,013 |
| essv16931138 | Submitted genomic | NC_000023.10:g.117 758976_117758977in s? | GRCh37 (hg19) | NC_000023.10 | ChrX | 117,758,976 | 117,758,976 |