esv3584640
- Organism: Homo sapiens
- Study:estd213 (Mokhtar et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:70,865
- Publication(s):Mokhtar et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 970 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 984 SVs from 78 studies. See in: genome view
Overlapping variant regions from other studies: 372 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3584640 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 55,198,132 | 55,268,996 |
| esv3584640 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 54,965,608 | 55,036,472 |
| esv3584640 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 54,722,184 | 54,793,048 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv9838730 | copy number loss | KSF024 | SNP array | Probe signal intensity | 42 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv9838730 | Remapped | Perfect | NC_000011.10:g.(?_ 55198132)_(5526899 6_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 55,198,132 | 55,268,996 |
| essv9838730 | Remapped | Perfect | NC_000011.9:g.(?_5 4965608)_(55036472 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 54,965,608 | 55,036,472 |
| essv9838730 | Submitted genomic | NC_000011.8:g.(?_5 4722184)_(54793048 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 54,722,184 | 54,793,048 |