| nstd213 | nssv17677376 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 11368983 | | | 11368983 | | Remapped | 1 |
| nstd213 | nssv17677376 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 8367752 | | | 8367752 | | Remapped | 1 |
| nstd213 | nssv17677380 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 18503506 | | | 19373507 | | Remapped | 1 |
| nstd213 | nssv17677583 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 46494328 | | | 47184329 | | Remapped | 1 |
| nstd213 | nssv17677605 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 29263488 | | | 29551570 | | Remapped | 0.99338 |
| nstd213 | nssv17677614 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 32934399 | | | 36484400 | | Remapped | 1 |
| nstd213 | nssv17677762 | | copy number gain | | Sequencing | Paired-end mapping | No | LAPC4-CR | | | GRCh38.p12 | NC_000001.11 | 1 | | 5499940 | | | 5759941 | | Remapped | 1 |
| nstd213 | nssv17677792 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 11372414 | | | 11372414 | | Remapped | 1 |
| nstd213 | nssv17677792 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 26622846 | | | 26622846 | | Remapped | 1 |
| nstd213 | nssv17677849 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 20303507 | | | 22273508 | | Remapped | 1 |
| nstd213 | nssv17678033 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 7199940 | | | 8249941 | | Remapped | 1 |
| nstd213 | nssv17678059 | | copy number gain | | Sequencing | Paired-end mapping | No | CWR22Rv1 | | | GRCh38.p12 | NC_000001.11 | 1 | | 16863505 | | | 16943506 | | Remapped | 1 |
| nstd213 | nssv17678127 | | duplication | | Sequencing | Paired-end mapping | No | LAPC4-CR | | | GRCh38.p12 | NC_000001.11 | 1 | 25566757 | | 25566772 | 25637706 | | 25637726 | Remapped | 1 |
| nstd213 | nssv17678153 | | deletion | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | 50115329 | | 50115332 | 50611052 | | 50611055 | Remapped | 1 |
| nstd213 | nssv17678194 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 53574327 | | | 53724328 | | Remapped | 1 |
| nstd213 | nssv17678254 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 43604329 | | | 46104329 | | Remapped | 1 |
| nstd213 | nssv17678309 | | deletion | | Sequencing | Paired-end mapping | No | RWPE-1 | | | GRCh38.p12 | NC_000001.11 | 1 | 55777015 | | 55777018 | 55843201 | | 55843202 | Remapped | 1 |
| nstd213 | nssv17678375 | | copy number loss | | Sequencing | Paired-end mapping | No | VCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 23683510 | | | 24043511 | | Remapped | 1 |
| nstd213 | nssv17678446 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 9219941 | | | 9469942 | | Remapped | 1 |
| nstd213 | nssv17678449 | | copy number gain | | Sequencing | Paired-end mapping | No | VCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 5829940 | | | 5969941 | | Remapped | 1 |
| nstd213 | nssv17678588 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 10749943 | | | 10839944 | | Remapped | 1 |
| nstd213 | nssv17678613 | | copy number loss | | Sequencing | Paired-end mapping | No | LNCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 14743504 | | | 16563506 | | Remapped | 1 |
| nstd213 | nssv17678671 | | copy number gain | | Sequencing | Paired-end mapping | No | LAPC4 | | | GRCh38.p12 | NC_000001.11 | 1 | | 6899940 | | | 7069941 | | Remapped | 1 |
| nstd213 | nssv17678694 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 21723507 | | | 21813508 | | Remapped | 1 |
| nstd213 | nssv17678702 | | copy number gain | | Sequencing | Paired-end mapping | No | LAPC4-CR | | | GRCh38.p12 | NC_000001.11 | 1 | | 16863505 | | | 16953506 | | Remapped | 1 |
| nstd213 | nssv17678713 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 24703509 | | | 24863510 | | Remapped | 1 |
| nstd213 | nssv17678763 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 6969940 | | | 7119941 | | Remapped | 1 |
| nstd213 | nssv17678895 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 22973507 | | | 28603489 | | Remapped | 1 |
| nstd213 | nssv17678920 | | copy number loss | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 14743504 | | | 16503506 | | Remapped | 1 |
| nstd213 | nssv17678990 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 29243488 | | | 29353489 | | Remapped | 1 |
| nstd213 | nssv17679042 | | copy number loss | | Sequencing | Paired-end mapping | No | VCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 35304399 | | | 35634400 | | Remapped | 1 |
| nstd213 | nssv17679099 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 29493488 | | | 29551570 | | Remapped | 0.96802 |
| nstd213 | nssv17679123 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 8369940 | | | 11579944 | | Remapped | 1 |
| nstd213 | nssv17679145 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 11372388 | | | 11372388 | | Remapped | 1 |
| nstd213 | nssv17679145 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 26622858 | | | 26622858 | | Remapped | 1 |
| nstd213 | nssv17679181 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 8319940 | | | 8409941 | | Remapped | 1 |
| nstd213 | nssv17679184 | | copy number gain | | Sequencing | Paired-end mapping | No | LAPC4 | | | GRCh38.p12 | NC_000001.11 | 1 | | 16863505 | | | 16943506 | | Remapped | 1 |
| nstd213 | nssv17679322 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 55194327 | | | 55584328 | | Remapped | 1 |
| nstd213 | nssv17679372 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 21003507 | | | 21143508 | | Remapped | 1 |
| nstd213 | nssv17679413 | | copy number gain | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 16873505 | | | 16943506 | | Remapped | 1 |
| nstd213 | nssv17679533 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 20023507 | | | 20243508 | | Remapped | 1 |
| nstd213 | nssv17679743 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 784620 | | | 1644640 | | Remapped | 1.00002 |
| nstd213 | nssv17679834 | | copy number loss | | Sequencing | Paired-end mapping | No | CWR22Rv1 | | | GRCh38.p12 | NC_000001.11 | 1 | | 34894399 | | | 35014400 | | Remapped | 1 |
| nstd213 | nssv17679871 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 7259940 | | | 7359941 | | Remapped | 1 |
| nstd213 | nssv17679888 | | copy number loss | | Sequencing | Paired-end mapping | No | VCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 20873507 | | | 21063508 | | Remapped | 1 |
| nstd213 | nssv17680080 | | copy number gain | | Sequencing | Paired-end mapping | No | LAPC4-CR | | | GRCh38.p12 | NC_000001.11 | 1 | | 7189940 | | | 7289941 | | Remapped | 1 |
| nstd213 | nssv17680139 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 19133506 | | | 19243507 | | Remapped | 1 |
| nstd213 | nssv17680256 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 11372402 | | | 11372402 | | Remapped | 1 |
| nstd213 | nssv17680256 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 26622852 | | | 26622852 | | Remapped | 1 |
| nstd213 | nssv17680268 | | copy number loss | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 16943505 | | | 26623510 | | Remapped | 1 |
| nstd213 | nssv17680290 | | copy number gain | | Sequencing | Paired-end mapping | No | LAPC4-CR | | | GRCh38.p12 | NC_000001.11 | 1 | | 7699940 | | | 7799941 | | Remapped | 1 |
| nstd213 | nssv17680307 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 11529943 | | | 11589944 | | Remapped | 1 |
| nstd213 | nssv17680371 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 24403510 | | | 24473511 | | Remapped | 1 |
| nstd213 | nssv17680472 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 2773454 | | | 3173437 | | Remapped | 0.99996 |
| nstd213 | nssv17680493 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 48814328 | | | 49324329 | | Remapped | 1 |
| nstd213 | nssv17680509 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 24963509 | | | 25083510 | | Remapped | 1 |
| nstd213 | nssv17680582 | | copy number gain | | Sequencing | Paired-end mapping | No | MDA-Pca-2b | | | GRCh38.p12 | NC_000001.11 | 1 | | 16873505 | | | 16933506 | | Remapped | 1 |
| nstd213 | nssv17680613 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 13633505 | | | 13893506 | | Remapped | 1 |
| nstd213 | nssv17680777 | | duplication | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | 8774169 | | 8774171 | 9094662 | | 9094664 | Remapped | 1 |
| nstd213 | nssv17680962 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 23193507 | | | 23273508 | | Remapped | 1 |
| nstd213 | nssv17680993 | | copy number gain | | Sequencing | Paired-end mapping | No | LAPC4-CR | | | GRCh38.p12 | NC_000001.11 | 1 | | 3723436 | | | 3883437 | | Remapped | 1 |
| nstd213 | nssv17681072 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 55754327 | | | 56944328 | | Remapped | 1 |
| nstd213 | nssv17681205 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 17643505 | | | 17723506 | | Remapped | 1 |
| nstd213 | nssv17681371 | | copy number loss | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 14743504 | | | 16563506 | | Remapped | 1 |
| nstd213 | nssv17681425 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 8403779 | | | 8403779 | | Remapped | 1 |
| nstd213 | nssv17681425 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 9696844 | | | 9696844 | | Remapped | 1 |
| nstd213 | nssv17681467 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 10713844 | | | 10713844 | | Remapped | 1 |
| nstd213 | nssv17681467 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 14744298 | | | 14744298 | | Remapped | 1 |
| nstd213 | nssv17681490 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 6239940 | | | 6949941 | | Remapped | 1 |
| nstd213 | nssv17681502 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 4409940 | | | 4869941 | | Remapped | 1 |
| nstd213 | nssv17681518 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 49134328 | | | 49314329 | | Remapped | 1 |
| nstd213 | nssv17681536 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 30877153 | | | 32824400 | | Remapped | 1.00374 |
| nstd213 | nssv17681579 | | copy number loss | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 16953505 | | | 26623510 | | Remapped | 1 |
| nstd213 | nssv17681596 | | copy number gain | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 8859941 | | | 9039942 | | Remapped | 1 |
| nstd213 | nssv17681624 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 12108243 | | | 12108243 | | Remapped | 1 |
| nstd213 | nssv17681624 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 9694561 | | | 9694561 | | Remapped | 1 |
| nstd213 | nssv17681670 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 1748561 | | | 1958562 | | Remapped | 1 |
| nstd213 | nssv17681721 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 29557153 | | | 29867154 | | Remapped | 1 |
| nstd213 | nssv17681733 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 3939940 | | | 4219941 | | Remapped | 1 |
| nstd213 | nssv17681758 | | duplication | | Sequencing | Paired-end mapping | No | LAPC4-CR | | | GRCh38.p12 | NC_000001.11 | 1 | 47130353 | | 47130355 | 47232273 | | 47232275 | Remapped | 1 |
| nstd213 | nssv17681801 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 50214328 | | | 52994329 | | Remapped | 1 |
| nstd213 | nssv17681962 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 8403758 | | | 8403758 | | Remapped | 1 |
| nstd213 | nssv17681962 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 9696858 | | | 9696858 | | Remapped | 1 |
| nstd213 | nssv17682029 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 10979943 | | | 11089944 | | Remapped | 1 |
| nstd213 | nssv17682165 | | duplication | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | 15819520 | | 15819539 | 15889270 | | 15889290 | Remapped | 1 |
| nstd213 | nssv17682185 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 10713824 | | | 10713824 | | Remapped | 1 |
| nstd213 | nssv17682185 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_C42b | | | GRCh38.p12 | NC_000001.11 | 1 | | 14744301 | | | 14744301 | | Remapped | 1 |
| nstd213 | nssv17682248 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 19543506 | | | 20203508 | | Remapped | 1 |
| nstd213 | nssv17682462 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 8579941 | | | 8749942 | | Remapped | 1 |
| nstd213 | nssv17682900 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 14983504 | | | 15523506 | | Remapped | 1 |
| nstd213 | nssv17682936 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 13190972 | | | 13833506 | | Remapped | 1.25987 |
| nstd213 | nssv17682941 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 11368980 | | | 11368980 | | Remapped | 1 |
| nstd213 | nssv17682941 | | intrachromosomal translocation | | Sequencing | Paired-end mapping | No | LNCaP_Abl | | | GRCh38.p12 | NC_000001.11 | 1 | | 8367752 | | | 8367752 | | Remapped | 1 |
| nstd213 | nssv17682974 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 47454328 | | | 47704329 | | Remapped | 1 |
| nstd213 | nssv17682981 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 37014399 | | | 43464330 | | Remapped | 0.99999 |
| nstd213 | nssv17682990 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 14493504 | | | 14583505 | | Remapped | 1 |
| nstd213 | nssv17683039 | | copy number loss | | Sequencing | Paired-end mapping | No | PC3 | | | GRCh38.p12 | NC_000001.11 | 1 | | 10169942 | | | 10239943 | | Remapped | 1 |
| nstd213 | nssv17683259 | | copy number loss | | Sequencing | Paired-end mapping | No | DU145 | | | GRCh38.p12 | NC_000001.11 | 1 | | 15773505 | | | 15983506 | | Remapped | 1 |
| nstd213 | nssv17683290 | | copy number loss | | Sequencing | Paired-end mapping | No | LNCaP | | | GRCh38.p12 | NC_000001.11 | 1 | | 16943505 | | | 26633510 | | Remapped | 1 |
| nstd213 | nssv17683333 | | copy number gain | | Sequencing | Paired-end mapping | No | LAPC4-CR | | | GRCh38.p12 | NC_000001.11 | 1 | | 8219940 | | | 8319941 | | Remapped | 1 |
