nstd145 (Lu et al. 2017)
- Organism:
- Human
- Study Type:
- Control Set
- Submitter:
- Haiyi Lou
- Description:
- We used 4.2M NimbleGen CGH array with a pooling reference of 200 Han Chinese to detect genome-wide CNVs in 425 male Han Chinese samples from 28 dialect groups in China. Based on the results, we built a high-quality CNV map which could serve as resources for medical and genetic studies. See Variant Summary counts for nstd145 in dbVar Variant Summary.
- Publication(s):
- Lu et al. 2017
Detailed Information: Download 8237 Variant Regions, Download 26917 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Submitted: GRCh37 (hg19)
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.11 | Chr1 | 780 | 2,601 | Remapped | NC_000001.11 |
| NC_000002.12 | Chr2 | 538 | 1,859 | Remapped | NC_000002.12 |
| NC_000003.12 | Chr3 | 608 | 2,205 | Remapped | NC_000003.12 |
| NC_000004.12 | Chr4 | 642 | 2,130 | Remapped | NC_000004.12 |
| NC_000005.10 | Chr5 | 347 | 1,423 | Remapped | NC_000005.10 |
| NC_000006.12 | Chr6 | 511 | 1,624 | Remapped | NC_000006.12 |
| NC_000007.14 | Chr7 | 428 | 1,811 | Remapped | NC_000007.14 |
| NC_000008.11 | Chr8 | 371 | 1,383 | Remapped | NC_000008.11 |
| NC_000009.12 | Chr9 | 321 | 866 | Remapped | NC_000009.12 |
| NC_000010.11 | Chr10 | 322 | 764 | Remapped | NC_000010.11 |
| NC_000011.10 | Chr11 | 348 | 1,023 | Remapped | NC_000011.10 |
| NC_000012.12 | Chr12 | 307 | 1,301 | Remapped | NC_000012.12 |
| NC_000013.11 | Chr13 | 208 | 705 | Remapped | NC_000013.11 |
| NC_000014.9 | Chr14 | 315 | 885 | Remapped | NC_000014.9 |
| NC_000015.10 | Chr15 | 280 | 658 | Remapped | NC_000015.10 |
| NC_000016.10 | Chr16 | 308 | 740 | Remapped | NC_000016.10 |
| NC_000017.11 | Chr17 | 257 | 819 | Remapped | NC_000017.11 |
| NC_000018.10 | Chr18 | 218 | 623 | Remapped | NC_000018.10 |
| NC_000019.10 | Chr19 | 331 | 1,029 | Remapped | NC_000019.10 |
| NC_000020.11 | Chr20 | 163 | 509 | Remapped | NC_000020.11 |
| NC_000021.9 | Chr21 | 116 | 391 | Remapped | NC_000021.9 |
| NC_000022.11 | Chr22 | 149 | 618 | Remapped | NC_000022.11 |
| NC_000023.11 | ChrX | 240 | 539 | Remapped | NC_000023.11 |
| NC_000024.10 | ChrY | 72 | 118 | Remapped | NC_000024.10 |
| NT_187519.1 | Chr1|NT_187519.1 | 1 | 1 | Remapped | NT_187519.1 |
| NT_187521.1 | Chr1|NT_187521.1 | 1 | 1 | Remapped | NT_187521.1 |
| NW_009646195.1 | Chr1|NW_009646195.1 | 1 | 1 | Remapped | NW_009646195.1 |
| NW_011332687.1 | Chr1|NW_011332687.1 | 1 | 1 | Remapped | NW_011332687.1 |
| NW_012132914.1 | Chr1|NW_012132914.1 | 6 | 20 | Remapped | NW_012132914.1 |
| NW_017852928.1 | Chr1|NW_017852928.1 | 1 | 46 | Remapped | NW_017852928.1 |
| NW_018654706.1 | Chr1|NW_018654706.1 | 1 | 1 | Remapped | NW_018654706.1 |
| NW_018654707.1 | Chr1|NW_018654707.1 | 41 | 211 | Remapped | NW_018654707.1 |
| NT_187523.1 | Chr2|NT_187523.1 | 4 | 4 | Remapped | NT_187523.1 |
| NT_187530.1 | Chr2|NT_187530.1 | 1 | 1 | Remapped | NT_187530.1 |
| NT_187647.1 | Chr2|NT_187647.1 | 4 | 4 | Remapped | NT_187647.1 |
| NW_003315908.1 | Chr2|NW_003315908.1 | 1 | 1 | Remapped | NW_003315908.1 |
| NW_018654709.1 | Chr2|NW_018654709.1 | 1 | 1 | Remapped | NW_018654709.1 |
| NT_187539.1 | Chr3|NT_187539.1 | 1 | 2 | Remapped | NT_187539.1 |
| NW_019805488.1 | Chr3|NW_019805488.1 | 1 | 1 | Remapped | NW_019805488.1 |
| NW_019805489.1 | Chr3|NW_019805489.1 | 1 | 1 | Remapped | NW_019805489.1 |
| NW_019805492.1 | Chr3|NW_019805492.1 | 2 | 2 | Remapped | NW_019805492.1 |
| NT_187679.1 | Chr4|NT_187679.1 | 1 | 2 | Remapped | NT_187679.1 |
| NT_187540.1 | Chr4|NT_187540.1 | 1 | 1 | Remapped | NT_187540.1 |
| NT_187542.1 | Chr4|NT_187542.1 | 1 | 2 | Remapped | NT_187542.1 |
| NT_187545.1 | Chr4|NT_187545.1 | 1 | 2 | Remapped | NT_187545.1 |
| NW_003315915.1 | Chr4|NW_003315915.1 | 14 | 54 | Remapped | NW_003315915.1 |
| NT_187548.1 | Chr5|NT_187548.1 | 1 | 1 | Remapped | NT_187548.1 |
| NT_187651.1 | Chr5|NT_187651.1 | 1 | 1 | Remapped | NT_187651.1 |
| NW_003315917.2 | Chr5|NW_003315917.2 | 1 | 1 | Remapped | NW_003315917.2 |
| NW_003315920.1 | Chr5|NW_003315920.1 | 1 | 1 | Remapped | NW_003315920.1 |
| NW_016107297.1 | Chr5|NW_016107297.1 | 1 | 1 | Remapped | NW_016107297.1 |
| NW_016107298.1 | Chr5|NW_016107298.1 | 4 | 5 | Remapped | NW_016107298.1 |
| NT_187553.1 | Chr6|NT_187553.1 | 1 | 2 | Remapped | NT_187553.1 |
| NT_187556.1 | Chr6|NT_187556.1 | 1 | 1 | Remapped | NT_187556.1 |
| NW_004166862.2 | Chr6|NW_004166862.2 | 1 | 1 | Remapped | NW_004166862.2 |
| NW_018654713.1 | Chr6|NW_018654713.1 | 3 | 3 | Remapped | NW_018654713.1 |
| NT_187558.1 | Chr7|NT_187558.1 | 17 | 124 | Remapped | NT_187558.1 |
| NT_187562.1 | Chr7|NT_187562.1 | 13 | 107 | Remapped | NT_187562.1 |
| NT_187563.1 | Chr7|NT_187563.1 | 1 | 1 | Remapped | NT_187563.1 |
| NT_187564.1 | Chr7|NT_187564.1 | 1 | 1 | Remapped | NT_187564.1 |
| NT_187653.1 | Chr7|NT_187653.1 | 17 | 124 | Remapped | NT_187653.1 |
| NW_017852930.1 | Chr7|NW_017852930.1 | 1 | 1 | Remapped | NW_017852930.1 |
| NW_018654714.1 | Chr7|NW_018654714.1 | 4 | 9 | Remapped | NW_018654714.1 |
| NT_187576.1 | Chr8|NT_187576.1 | 25 | 70 | Remapped | NT_187576.1 |
| NT_187577.1 | Chr8|NT_187577.1 | 2 | 2 | Remapped | NT_187577.1 |
| NT_187655.1 | Chr8|NT_187655.1 | 1 | 1 | Remapped | NT_187655.1 |
| NW_017852931.1 | Chr8|NW_017852931.1 | 2 | 4 | Remapped | NW_017852931.1 |
| NW_018654717.1 | Chr8|NW_018654717.1 | 12 | 71 | Remapped | NW_018654717.1 |
| NT_187578.1 | Chr9|NT_187578.1 | 2 | 2 | Remapped | NT_187578.1 |
| NW_013171806.1 | Chr10|NW_013171806.1 | 4 | 71 | Remapped | NW_013171806.1 |
| NW_013171807.1 | Chr10|NW_013171807.1 | 1 | 1 | Remapped | NW_013171807.1 |
| NT_187583.1 | Chr11|NT_187583.1 | 6 | 63 | Remapped | NT_187583.1 |
| NT_187586.1 | Chr11|NT_187586.1 | 1 | 1 | Remapped | NT_187586.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 2 | 3 | Remapped | NW_003315936.1 |
| NW_011332695.1 | Chr11|NW_011332695.1 | 6 | 63 | Remapped | NW_011332695.1 |
| NW_019805495.1 | Chr11|NW_019805495.1 | 2 | 3 | Remapped | NW_019805495.1 |
| NW_019805496.1 | Chr11|NW_019805496.1 | 1 | 1 | Remapped | NW_019805496.1 |
| NT_187658.1 | Chr12|NT_187658.1 | 10 | 32 | Remapped | NT_187658.1 |
| NW_003315941.1 | Chr12|NW_003315941.1 | 1 | 1 | Remapped | NW_003315941.1 |
| NW_003571050.1 | Chr12|NW_003571050.1 | 1 | 2 | Remapped | NW_003571050.1 |
| NW_011332696.1 | Chr12|NW_011332696.1 | 1 | 1 | Remapped | NW_011332696.1 |
| NW_013171809.1 | Chr12|NW_013171809.1 | 2 | 3 | Remapped | NW_013171809.1 |
| NW_018654718.1 | Chr12|NW_018654718.1 | 1 | 1 | Remapped | NW_018654718.1 |
| NT_187593.1 | Chr13|NT_187593.1 | 1 | 1 | Remapped | NT_187593.1 |
| NT_187600.1 | Chr14|NT_187600.1 | 5 | 7 | Remapped | NT_187600.1 |
| NT_187601.1 | Chr14|NT_187601.1 | 2 | 2 | Remapped | NT_187601.1 |
| NW_018654722.1 | Chr14|NW_018654722.1 | 1 | 1 | Remapped | NW_018654722.1 |
| NT_187659.1 | Chr15|NT_187659.1 | 1 | 1 | Remapped | NT_187659.1 |
| NT_187660.1 | Chr15|NT_187660.1 | 10 | 20 | Remapped | NT_187660.1 |
| NT_187603.1 | Chr15|NT_187603.1 | 1 | 1 | Remapped | NT_187603.1 |
| NW_011332701.1 | Chr15|NW_011332701.1 | 11 | 22 | Remapped | NW_011332701.1 |
| NT_187607.1 | Chr16|NT_187607.1 | 7 | 13 | Remapped | NT_187607.1 |
| NT_187608.1 | Chr16|NT_187608.1 | 1 | 1 | Remapped | NT_187608.1 |
| NT_187610.1 | Chr16|NT_187610.1 | 2 | 2 | Remapped | NT_187610.1 |
| NW_012132921.1 | Chr16|NW_012132921.1 | 4 | 5 | Remapped | NW_012132921.1 |
| NW_017852933.1 | Chr16|NW_017852933.1 | 3 | 3 | Remapped | NW_017852933.1 |
| NW_019805500.1 | Chr16|NW_019805500.1 | 4 | 16 | Remapped | NW_019805500.1 |
| NT_187661.1 | Chr17|NT_187661.1 | 21 | 55 | Remapped | NT_187661.1 |
| NT_187664.1 | Chr17|NT_187664.1 | 1 | 1 | Remapped | NT_187664.1 |
| NW_003871093.1 | Chr17|NW_003871093.1 | 15 | 188 | Remapped | NW_003871093.1 |
| NT_187612.1 | Chr17|NT_187612.1 | 2 | 2 | Remapped | NT_187612.1 |
| NT_187613.1 | Chr17|NT_187613.1 | 4 | 5 | Remapped | NT_187613.1 |
| NT_187614.1 | Chr17|NT_187614.1 | 21 | 43 | Remapped | NT_187614.1 |
| NW_003871091.1 | Chr17|NW_003871091.1 | 4 | 4 | Remapped | NW_003871091.1 |
| NT_187665.1 | Chr18|NT_187665.1 | 14 | 36 | Remapped | NT_187665.1 |
| NT_187617.1 | Chr18|NT_187617.1 | 2 | 2 | Remapped | NT_187617.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 14 | 36 | Remapped | NW_003315958.1 |
| NW_003315960.1 | Chr18|NW_003315960.1 | 1 | 1 | Remapped | NW_003315960.1 |
| NT_187693.1 | Chr19|NT_187693.1 | 18 | 82 | Remapped | NT_187693.1 |
| NW_003571061.2 | Chr19|NW_003571061.2 | 11 | 68 | Remapped | NW_003571061.2 |
| NW_003571057.2 | Chr19|NW_003571057.2 | 10 | 66 | Remapped | NW_003571057.2 |
| NW_003571058.2 | Chr19|NW_003571058.2 | 10 | 66 | Remapped | NW_003571058.2 |
| NW_003571059.2 | Chr19|NW_003571059.2 | 10 | 66 | Remapped | NW_003571059.2 |
| NW_003571060.1 | Chr19|NW_003571060.1 | 16 | 80 | Remapped | NW_003571060.1 |
| NW_003571056.2 | Chr19|NW_003571056.2 | 10 | 66 | Remapped | NW_003571056.2 |
| NW_003571055.2 | Chr19|NW_003571055.2 | 10 | 66 | Remapped | NW_003571055.2 |
| NT_187620.1 | Chr19|NT_187620.1 | 2 | 2 | Remapped | NT_187620.1 |
| NW_003315962.1 | Chr19|NW_003315962.1 | 5 | 6 | Remapped | NW_003315962.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 1 | 1 | Remapped | NW_003315963.1 |
| NW_003571054.1 | Chr19|NW_003571054.1 | 16 | 80 | Remapped | NW_003571054.1 |
| NT_187627.1 | Chr21|NT_187627.1 | 1 | 1 | Remapped | NT_187627.1 |
| NW_003315968.2 | Chr21|NW_003315968.2 | 15 | 67 | Remapped | NW_003315968.2 |
| NT_187629.1 | Chr22|NT_187629.1 | 1 | 1 | Remapped | NT_187629.1 |
| NT_187633.1 | Chr22|NT_187633.1 | 26 | 271 | Remapped | NT_187633.1 |
| NW_003315972.2 | Chr22|NW_003315972.2 | 4 | 33 | Remapped | NW_003315972.2 |
| NW_017363820.1 | ChrX|NW_017363820.1 | 1 | 1 | Remapped | NW_017363820.1 |
| NW_018654726.1 | ChrY|NW_018654726.1 | 3 | 5 | Remapped | NW_018654726.1 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.10 | Chr1 | 781 | 2,603 | Submitted | NC_000001.10 |
| NC_000002.11 | Chr2 | 538 | 1,859 | Submitted | NC_000002.11 |
| NC_000003.11 | Chr3 | 608 | 2,205 | Submitted | NC_000003.11 |
| NC_000004.11 | Chr4 | 642 | 2,130 | Submitted | NC_000004.11 |
| NC_000005.9 | Chr5 | 347 | 1,423 | Submitted | NC_000005.9 |
| NC_000006.11 | Chr6 | 511 | 1,624 | Submitted | NC_000006.11 |
| NC_000007.13 | Chr7 | 429 | 1,827 | Submitted | NC_000007.13 |
| NC_000008.10 | Chr8 | 376 | 1,389 | Submitted | NC_000008.10 |
| NC_000009.11 | Chr9 | 323 | 869 | Submitted | NC_000009.11 |
| NC_000010.10 | Chr10 | 322 | 764 | Submitted | NC_000010.10 |
| NC_000011.9 | Chr11 | 349 | 1,024 | Submitted | NC_000011.9 |
| NC_000012.11 | Chr12 | 307 | 1,301 | Submitted | NC_000012.11 |
| NC_000013.10 | Chr13 | 208 | 705 | Submitted | NC_000013.10 |
| NC_000014.8 | Chr14 | 330 | 938 | Submitted | NC_000014.8 |
| NC_000015.9 | Chr15 | 283 | 664 | Submitted | NC_000015.9 |
| NC_000016.9 | Chr16 | 308 | 740 | Submitted | NC_000016.9 |
| NC_000017.10 | Chr17 | 264 | 838 | Submitted | NC_000017.10 |
| NC_000018.9 | Chr18 | 218 | 623 | Submitted | NC_000018.9 |
| NC_000019.9 | Chr19 | 333 | 1,031 | Submitted | NC_000019.9 |
| NC_000020.10 | Chr20 | 163 | 509 | Submitted | NC_000020.10 |
| NC_000021.8 | Chr21 | 116 | 391 | Submitted | NC_000021.8 |
| NC_000022.10 | Chr22 | 169 | 803 | Submitted | NC_000022.10 |
| NC_000023.10 | ChrX | 240 | 539 | Submitted | NC_000023.10 |
| NC_000024.9 | ChrY | 72 | 118 | Submitted | NC_000024.9 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.10 | Chr1 | 781 | 680 | 39 | 8 | 1 | 53 | 2,603 | 2,233 | 76 | 10 | 2 | 282 |
| NC_000002.11 | Chr2 | 538 | 506 | 19 | 6 | 0 | 7 | 1,859 | 1,819 | 25 | 8 | 0 | 7 |
| NC_000003.11 | Chr3 | 608 | 601 | 2 | 0 | 0 | 5 | 2,205 | 2,197 | 2 | 0 | 0 | 6 |
| NC_000004.11 | Chr4 | 642 | 618 | 6 | 0 | 0 | 18 | 2,130 | 2,049 | 20 | 0 | 0 | 61 |
| NC_000005.9 | Chr5 | 347 | 338 | 1 | 0 | 0 | 8 | 1,423 | 1,413 | 1 | 0 | 0 | 9 |
| NC_000006.11 | Chr6 | 511 | 498 | 7 | 0 | 0 | 6 | 1,624 | 1,609 | 8 | 0 | 0 | 7 |
| NC_000007.13 | Chr7 | 429 | 384 | 5 | 4 | 0 | 36 | 1,827 | 1,590 | 5 | 5 | 0 | 227 |
| NC_000008.10 | Chr8 | 376 | 332 | 6 | 1 | 0 | 37 | 1,389 | 1,239 | 7 | 1 | 0 | 142 |
| NC_000009.11 | Chr9 | 323 | 314 | 0 | 4 | 2 | 3 | 869 | 858 | 0 | 5 | 3 | 3 |
| NC_000010.10 | Chr10 | 322 | 311 | 1 | 5 | 0 | 5 | 764 | 684 | 1 | 7 | 0 | 72 |
| NC_000011.9 | Chr11 | 349 | 328 | 8 | 0 | 1 | 12 | 1,024 | 930 | 22 | 0 | 1 | 71 |
| NC_000012.11 | Chr12 | 307 | 292 | 0 | 0 | 0 | 15 | 1,301 | 1,263 | 0 | 0 | 0 | 38 |
| NC_000013.10 | Chr13 | 208 | 204 | 3 | 0 | 0 | 1 | 705 | 701 | 3 | 0 | 0 | 1 |
| NC_000014.8 | Chr14 | 330 | 269 | 23 | 15 | 15 | 8 | 938 | 817 | 33 | 25 | 53 | 10 |
| NC_000015.9 | Chr15 | 283 | 234 | 17 | 17 | 3 | 12 | 664 | 578 | 21 | 36 | 6 | 23 |
| NC_000016.9 | Chr16 | 308 | 282 | 0 | 5 | 0 | 21 | 740 | 694 | 0 | 6 | 0 | 40 |
| NC_000017.10 | Chr17 | 264 | 206 | 6 | 8 | 0 | 44 | 838 | 572 | 6 | 20 | 0 | 240 |
| NC_000018.9 | Chr18 | 218 | 197 | 4 | 0 | 0 | 17 | 623 | 580 | 4 | 0 | 0 | 39 |
| NC_000019.9 | Chr19 | 333 | 301 | 7 | 1 | 0 | 24 | 1,031 | 932 | 9 | 1 | 0 | 89 |
| NC_000020.10 | Chr20 | 163 | 159 | 4 | 0 | 0 | 0 | 509 | 505 | 4 | 0 | 0 | 0 |
| NC_000021.8 | Chr21 | 116 | 94 | 6 | 0 | 0 | 16 | 391 | 316 | 7 | 0 | 0 | 68 |
| NC_000022.10 | Chr22 | 169 | 143 | 12 | 3 | 0 | 11 | 803 | 650 | 14 | 19 | 0 | 120 |
| NC_000023.10 | ChrX | 240 | 208 | 27 | 4 | 0 | 1 | 539 | 498 | 36 | 4 | 0 | 1 |
| NC_000024.9 | ChrY | 72 | 65 | 3 | 1 | 0 | 3 | 118 | 109 | 3 | 1 | 0 | 5 |
Samplesets
Number of Samplesets: 3
- Sampleset ID:
- 1
- Size:
- 425
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
- Sex:
- Male
| Sample ID | Subject ID | Sex | Ethnicity | Subject Phenotype |
|---|---|---|---|---|
| sample124 | sample124 | Male | Han Chinese | Not reported |
| sample121 | sample121 | Male | Han Chinese | Not reported |
| sample186 | sample186 | Male | Han Chinese | Not reported |
| sample187 | sample187 | Male | Han Chinese | Not reported |
| sample18 | sample18 | Male | Han Chinese | Not reported |
| sample159 | sample159 | Male | Han Chinese | Not reported |
| sample146 | sample146 | Male | Han Chinese | Not reported |
| sample177 | sample177 | Male | Han Chinese | Not reported |
| sample132 | sample132 | Male | Han Chinese | Not reported |
| sample152 | sample152 | Male | Han Chinese | Not reported |
| sample173 | sample173 | Male | Han Chinese | Not reported |
| sample113 | sample113 | Male | Han Chinese | Not reported |
| sample148 | sample148 | Male | Han Chinese | Not reported |
| sample134 | sample134 | Male | Han Chinese | Not reported |
| sample150 | sample150 | Male | Han Chinese | Not reported |
| sample176 | sample176 | Male | Han Chinese | Not reported |
| sample11 | sample11 | Male | Han Chinese | Not reported |
| sample126 | sample126 | Male | Han Chinese | Not reported |
| sample141 | sample141 | Male | Han Chinese | Not reported |
| sample119 | sample119 | Male | Han Chinese | Not reported |
| sample155 | sample155 | Male | Han Chinese | Not reported |
| sample110 | sample110 | Male | Han Chinese | Not reported |
| sample14 | sample14 | Male | Han Chinese | Not reported |
| sample1 | sample1 | Male | Han Chinese | Not reported |
| sample130 | sample130 | Male | Han Chinese | Not reported |
| sample123 | sample123 | Male | Han Chinese | Not reported |
| sample154 | sample154 | Male | Han Chinese | Not reported |
| sample106 | sample106 | Male | Han Chinese | Not reported |
| sample165 | sample165 | Male | Han Chinese | Not reported |
| sample164 | sample164 | Male | Han Chinese | Not reported |
| sample160 | sample160 | Male | Han Chinese | Not reported |
| sample163 | sample163 | Male | Han Chinese | Not reported |
| sample10 | sample10 | Male | Han Chinese | Not reported |
| sample117 | sample117 | Male | Han Chinese | Not reported |
| sample172 | sample172 | Male | Han Chinese | Not reported |
| sample142 | sample142 | Male | Han Chinese | Not reported |
| sample169 | sample169 | Male | Han Chinese | Not reported |
| sample149 | sample149 | Male | Han Chinese | Not reported |
| sample166 | sample166 | Male | Han Chinese | Not reported |
| sample145 | sample145 | Male | Han Chinese | Not reported |
| sample136 | sample136 | Male | Han Chinese | Not reported |
| sample183 | sample183 | Male | Han Chinese | Not reported |
| sample17 | sample17 | Male | Han Chinese | Not reported |
| sample112 | sample112 | Male | Han Chinese | Not reported |
| sample182 | sample182 | Male | Han Chinese | Not reported |
| sample156 | sample156 | Male | Han Chinese | Not reported |
| sample131 | sample131 | Male | Han Chinese | Not reported |
| sample105 | sample105 | Male | Han Chinese | Not reported |
| sample108 | sample108 | Male | Han Chinese | Not reported |
| sample137 | sample137 | Male | Han Chinese | Not reported |
| sample157 | sample157 | Male | Han Chinese | Not reported |
| sample144 | sample144 | Male | Han Chinese | Not reported |
| sample107 | sample107 | Male | Han Chinese | Not reported |
| sample161 | sample161 | Male | Han Chinese | Not reported |
| sample168 | sample168 | Male | Han Chinese | Not reported |
| sample143 | sample143 | Male | Han Chinese | Not reported |
| sample120 | sample120 | Male | Han Chinese | Not reported |
| sample127 | sample127 | Male | Han Chinese | Not reported |
| sample147 | sample147 | Male | Han Chinese | Not reported |
| sample151 | sample151 | Male | Han Chinese | Not reported |
| sample170 | sample170 | Male | Han Chinese | Not reported |
| sample167 | sample167 | Male | Han Chinese | Not reported |
| sample15 | sample15 | Male | Han Chinese | Not reported |
| sample101 | sample101 | Male | Han Chinese | Not reported |
| sample162 | sample162 | Male | Han Chinese | Not reported |
| sample100 | sample100 | Male | Han Chinese | Not reported |
| sample125 | sample125 | Male | Han Chinese | Not reported |
| sample109 | sample109 | Male | Han Chinese | Not reported |
| sample140 | sample140 | Male | Han Chinese | Not reported |
| sample114 | sample114 | Male | Han Chinese | Not reported |
| sample158 | sample158 | Male | Han Chinese | Not reported |
| sample115 | sample115 | Male | Han Chinese | Not reported |
| sample153 | sample153 | Male | Han Chinese | Not reported |
| sample188 | sample188 | Male | Han Chinese | Not reported |
| sample133 | sample133 | Male | Han Chinese | Not reported |
| sample122 | sample122 | Male | Han Chinese | Not reported |
| sample174 | sample174 | Male | Han Chinese | Not reported |
| sample129 | sample129 | Male | Han Chinese | Not reported |
| sample185 | sample185 | Male | Han Chinese | Not reported |
| sample104 | sample104 | Male | Han Chinese | Not reported |
| sample116 | sample116 | Male | Han Chinese | Not reported |
| sample184 | sample184 | Male | Han Chinese | Not reported |
| sample178 | sample178 | Male | Han Chinese | Not reported |
| sample128 | sample128 | Male | Han Chinese | Not reported |
| sample118 | sample118 | Male | Han Chinese | Not reported |
| sample102 | sample102 | Male | Han Chinese | Not reported |
| sample13 | sample13 | Male | Han Chinese | Not reported |
| sample179 | sample179 | Male | Han Chinese | Not reported |
| sample103 | sample103 | Male | Han Chinese | Not reported |
| sample180 | sample180 | Male | Han Chinese | Not reported |
| sample171 | sample171 | Male | Han Chinese | Not reported |
| sample12 | sample12 | Male | Han Chinese | Not reported |
| sample181 | sample181 | Male | Han Chinese | Not reported |
| sample138 | sample138 | Male | Han Chinese | Not reported |
| sample139 | sample139 | Male | Han Chinese | Not reported |
| sample135 | sample135 | Male | Han Chinese | Not reported |
| sample189 | sample189 | Male | Han Chinese | Not reported |
| sample111 | sample111 | Male | Han Chinese | Not reported |
| sample16 | sample16 | Male | Han Chinese | Not reported |
| sample175 | sample175 | Male | Han Chinese | Not reported |
- Sampleset ID:
- 2
- Size:
- 200
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
- Sex:
- Male
| Sample ID | Subject ID | Sex | Ethnicity | Subject Phenotype |
|---|---|---|---|---|
| sample296 | sample296 | Male | Han Chinese | Not reported |
| sample217 | sample217 | Male | Han Chinese | Not reported |
| sample124 | sample124 | Male | Han Chinese | Not reported |
| sample267 | sample267 | Male | Han Chinese | Not reported |
| sample264 | sample264 | Male | Han Chinese | Not reported |
| sample260 | sample260 | Male | Han Chinese | Not reported |
| sample349 | sample349 | Male | Han Chinese | Not reported |
| sample159 | sample159 | Male | Han Chinese | Not reported |
| sample317 | sample317 | Male | Han Chinese | Not reported |
| sample233 | sample233 | Male | Han Chinese | Not reported |
| sample146 | sample146 | Male | Han Chinese | Not reported |
| sample238 | sample238 | Male | Han Chinese | Not reported |
| sample307 | sample307 | Male | Han Chinese | Not reported |
| sample283 | sample283 | Male | Han Chinese | Not reported |
| sample282 | sample282 | Male | Han Chinese | Not reported |
| sample22 | sample22 | Male | Han Chinese | Not reported |
| sample262 | sample262 | Male | Han Chinese | Not reported |
| sample345 | sample345 | Male | Han Chinese | Not reported |
| sample277 | sample277 | Male | Han Chinese | Not reported |
| sample257 | sample257 | Male | Han Chinese | Not reported |
| sample173 | sample173 | Male | Han Chinese | Not reported |
| sample113 | sample113 | Male | Han Chinese | Not reported |
| sample251 | sample251 | Male | Han Chinese | Not reported |
| sample235 | sample235 | Male | Han Chinese | Not reported |
| sample2 | sample2 | Male | Han Chinese | Not reported |
| sample148 | sample148 | Male | Han Chinese | Not reported |
| sample134 | sample134 | Male | Han Chinese | Not reported |
| sample249 | sample249 | Male | Han Chinese | Not reported |
| sample150 | sample150 | Male | Han Chinese | Not reported |
| sample212 | sample212 | Male | Han Chinese | Not reported |
| sample119 | sample119 | Male | Han Chinese | Not reported |
| sample333 | sample333 | Male | Han Chinese | Not reported |
| sample271 | sample271 | Male | Han Chinese | Not reported |
| sample155 | sample155 | Male | Han Chinese | Not reported |
| sample273 | sample273 | Male | Han Chinese | Not reported |
| sample1 | sample1 | Male | Han Chinese | Not reported |
| sample123 | sample123 | Male | Han Chinese | Not reported |
| sample154 | sample154 | Male | Han Chinese | Not reported |
| sample318 | sample318 | Male | Han Chinese | Not reported |
| sample165 | sample165 | Male | Han Chinese | Not reported |
| sample225 | sample225 | Male | Han Chinese | Not reported |
| sample319 | sample319 | Male | Han Chinese | Not reported |
| sample209 | sample209 | Male | Han Chinese | Not reported |
| sample160 | sample160 | Male | Han Chinese | Not reported |
| sample309 | sample309 | Male | Han Chinese | Not reported |
| sample117 | sample117 | Male | Han Chinese | Not reported |
| sample259 | sample259 | Male | Han Chinese | Not reported |
| sample172 | sample172 | Male | Han Chinese | Not reported |
| sample142 | sample142 | Male | Han Chinese | Not reported |
| sample284 | sample284 | Male | Han Chinese | Not reported |
| sample183 | sample183 | Male | Han Chinese | Not reported |
| sample305 | sample305 | Male | Han Chinese | Not reported |
| sample202 | sample202 | Male | Han Chinese | Not reported |
| sample272 | sample272 | Male | Han Chinese | Not reported |
| sample195 | sample195 | Male | Han Chinese | Not reported |
| sample156 | sample156 | Male | Han Chinese | Not reported |
| sample3 | sample3 | Male | Han Chinese | Not reported |
| sample105 | sample105 | Male | Han Chinese | Not reported |
| sample204 | sample204 | Male | Han Chinese | Not reported |
| sample347 | sample347 | Male | Han Chinese | Not reported |
| sample210 | sample210 | Male | Han Chinese | Not reported |
| sample108 | sample108 | Male | Han Chinese | Not reported |
| sample245 | sample245 | Male | Han Chinese | Not reported |
| sample151 | sample151 | Male | Han Chinese | Not reported |
| sample313 | sample313 | Male | Han Chinese | Not reported |
| sample15 | sample15 | Male | Han Chinese | Not reported |
| sample207 | sample207 | Male | Han Chinese | Not reported |
| sample320 | sample320 | Male | Han Chinese | Not reported |
| sample200 | sample200 | Male | Han Chinese | Not reported |
| sample162 | sample162 | Male | Han Chinese | Not reported |
| sample100 | sample100 | Male | Han Chinese | Not reported |
| sample109 | sample109 | Male | Han Chinese | Not reported |
| sample229 | sample229 | Male | Han Chinese | Not reported |
| sample158 | sample158 | Male | Han Chinese | Not reported |
| sample153 | sample153 | Male | Han Chinese | Not reported |
| sample188 | sample188 | Male | Han Chinese | Not reported |
| sample133 | sample133 | Male | Han Chinese | Not reported |
| sample122 | sample122 | Male | Han Chinese | Not reported |
| sample191 | sample191 | Male | Han Chinese | Not reported |
| sample196 | sample196 | Male | Han Chinese | Not reported |
| sample192 | sample192 | Male | Han Chinese | Not reported |
| sample255 | sample255 | Male | Han Chinese | Not reported |
| sample21 | sample21 | Male | Han Chinese | Not reported |
| sample226 | sample226 | Male | Han Chinese | Not reported |
| sample184 | sample184 | Male | Han Chinese | Not reported |
| sample178 | sample178 | Male | Han Chinese | Not reported |
| sample328 | sample328 | Male | Han Chinese | Not reported |
| sample128 | sample128 | Male | Han Chinese | Not reported |
| sample240 | sample240 | Male | Han Chinese | Not reported |
| sample265 | sample265 | Male | Han Chinese | Not reported |
| sample335 | sample335 | Male | Han Chinese | Not reported |
| sample13 | sample13 | Male | Han Chinese | Not reported |
| sample103 | sample103 | Male | Han Chinese | Not reported |
| sample236 | sample236 | Male | Han Chinese | Not reported |
| sample180 | sample180 | Male | Han Chinese | Not reported |
| sample139 | sample139 | Male | Han Chinese | Not reported |
| sample135 | sample135 | Male | Han Chinese | Not reported |
| sample111 | sample111 | Male | Han Chinese | Not reported |
| sample16 | sample16 | Male | Han Chinese | Not reported |
| sample175 | sample175 | Male | Han Chinese | Not reported |
- Sampleset ID:
- 3
- Name:
- Pooled 200 Han Chinese
- Sampleset Type:
- Control
- Description:
- Pooled DNA from 200 samples in sampleset 2
- Size:
- 1
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
- Sex:
- Male
| Sample ID | Subject ID | Sex | Ethnicity | Subject Phenotype |
|---|---|---|---|---|
| pooled_200 | sampleset2 | Male | Han Chinese | Not reported |
Experimental Details
| Experiment ID | Type | Method | Analysis | Number of Variant Calls |
|---|---|---|---|---|
| 1 | Discovery | Oligo aCGH | Probe signal intensity | 26,917 |