ClinVar Genomic variation as it relates to human health
NM_033337.3(CAV3):c.80G>A (p.Arg27Gln)
The aggregate germline classification for this variant, typically for a monogenic or Mendelian disorder as in the ACMG/AMP guidelines, or for response to a drug. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the aggregate classification.
Stars represent the aggregate review status, or the level of review supporting the aggregate germline classification for this VCV record. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the review status. The number of submissions which contribute to this review status is shown in parentheses.
No data submitted for somatic clinical impact
No data submitted for oncogenicity
Variant Details
- Identifiers
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NM_033337.3(CAV3):c.80G>A (p.Arg27Gln)
Variation ID: 8283 Accession: VCV000008283.51
- Type and length
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single nucleotide variant, 1 bp
- Location
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Cytogenetic: 3p25.3 3: 8733956 (GRCh38) [ NCBI UCSC ] 3: 8775642 (GRCh37) [ NCBI UCSC ]
- Timeline in ClinVar
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First in ClinVar Help The date this variant first appeared in ClinVar with each type of classification.
Last submission Help The date of the most recent submission for each type of classification for this variant.
Last evaluated Help The most recent date that a submitter evaluated this variant for each type of classification.
Germline Apr 4, 2013 Nov 17, 2024 Oct 24, 2024 - HGVS
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Nucleotide Protein Molecular
consequenceNM_033337.3:c.80G>A MANE Select Help Transcripts from the Matched Annotation from the NCBI and EMBL-EBI (MANE) collaboration.
NP_203123.1:p.Arg27Gln missense NM_001234.5:c.80G>A NP_001225.1:p.Arg27Gln missense NC_000003.12:g.8733956G>A NC_000003.11:g.8775642G>A NG_008797.2:g.5147G>A LRG_329:g.5147G>A LRG_329t1:c.80G>A LRG_329p1:p.Arg27Gln P56539:p.Arg27Gln - Protein change
- R27Q
- Other names
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NM_001234.4(CAV3):c.80G>A(p.Arg27Gln)
NM_033337.2(CAV3):c.80G>A(p.Arg27Gln)
- Canonical SPDI
- NC_000003.12:8733955:G:A
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Functional
consequence HelpThe effect of the variant on RNA or protein function, based on experimental evidence from submitters.
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functional variant; Sequence Ontology [ SO:0001536]
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Global minor allele
frequency (GMAF) HelpThe global minor allele frequency calculated by the 1000 Genomes Project. The minor allele at this location is indicated in parentheses and may be different from the allele represented by this VCV record.
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Allele frequency
Help
The frequency of the allele represented by this VCV record.
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The Genome Aggregation Database (gnomAD) 0.00001
- Links
Genes
Gene | OMIM | ClinGen Gene Dosage Sensitivity Curation |
Variation Viewer
Help
Links to Variation Viewer, a genome browser to view variation data from NCBI databases. |
Related variants | ||
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HI score
Help
The haploinsufficiency score for the gene, curated by ClinGen’s Dosage Sensitivity Curation task team. |
TS score
Help
The triplosensitivity score for the gene, curated by ClinGen’s Dosage Sensitivity Curation task team. |
Within gene
Help
The number of variants in ClinVar that are contained within this gene, with a link to view the list of variants. |
All
Help
The number of variants in ClinVar for this gene, including smaller variants within the gene and larger CNVs that overlap or fully contain the gene. |
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CAV3 | - | - |
GRCh38 GRCh37 |
102 | 445 | |
SSUH2 | - | - |
GRCh38 GRCh37 |
33 | 99 |
Conditions - Germline
Condition
Help
The condition for this variant-condition (RCV) record in ClinVar. |
Classification
Help
The aggregate germline classification for this variant-condition (RCV) record in ClinVar. The number of submissions that contribute to this aggregate classification is shown in parentheses. (# of submissions) |
Review status
Help
The aggregate review status for this variant-condition (RCV) record in ClinVar. This value is calculated by NCBI based on data from submitters. Read our rules for calculating the review status. |
Last evaluated
Help
The most recent date that a submitter evaluated this variant for the condition. |
Variation/condition record
Help
The RCV accession number, with most recent version number, for the variant-condition record, with a link to the RCV web page. |
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Pathogenic (1) |
no assertion criteria provided
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Jan 15, 2009 | RCV000008777.6 | |
Pathogenic (4) |
criteria provided, multiple submitters, no conflicts
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Sep 4, 2024 | RCV000008778.13 | |
Pathogenic (4) |
criteria provided, multiple submitters, no conflicts
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Aug 27, 2024 | RCV000023083.13 | |
Pathogenic (6) |
criteria provided, multiple submitters, no conflicts
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Oct 24, 2024 | RCV000408119.37 | |
Pathogenic (1) |
criteria provided, single submitter
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Dec 18, 2023 | RCV000527324.10 | |
Pathogenic (1) |
criteria provided, single submitter
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Jul 26, 2021 | RCV002490340.2 |
Submissions - Germline
Classification
Help
The submitted germline classification for each SCV record. (Last evaluated) |
Review status
Help
Stars represent the review status, or the level of review supporting the submitted (SCV) record. This value is calculated by NCBI based on data from the submitter. Read our rules for calculating the review status. This column also includes a link to the submitter’s assertion criteria if provided, and the collection method. (Assertion criteria) |
Condition
Help
The condition for the classification, provided by the submitter for this submitted (SCV) record. This column also includes the affected status and allele origin of individuals observed with this variant. |
Submitter
Help
The submitting organization for this submitted (SCV) record. This column also includes the SCV accession and version number, the date this SCV first appeared in ClinVar, and the date that this SCV was last updated in ClinVar. |
More information
Help
This column includes more information supporting the classification, including citations, the comment on classification, and detailed evidence provided as observations of the variant by the submitter. |
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Pathogenic
(Feb 24, 2017)
|
criteria provided, single submitter
Method: clinical testing
|
not provided
Affected status: unknown
Allele origin:
germline
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Eurofins Ntd Llc (ga)
Accession: SCV000338152.4
First in ClinVar: Dec 06, 2016 Last updated: Dec 15, 2018 |
Number of individuals with the variant: 8
Sex: mixed
|
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Pathogenic
(Mar 13, 2020)
|
criteria provided, single submitter
Method: clinical testing
|
Distal myopathy, Tateyama type
(Autosomal dominant inheritance)
Affected status: yes
Allele origin:
maternal
|
Institute of Human Genetics Munich, Klinikum Rechts Der Isar, TU München
Accession: SCV001430063.1
First in ClinVar: Aug 21, 2020 Last updated: Aug 21, 2020 |
Clinical Features:
Myopathy (present) , Microcephaly (present) , Pectus excavatum (present) , Skeletal muscle hypertrophy (present)
Sex: male
Tissue: blood
|
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Pathogenic
(Aug 26, 2022)
|
criteria provided, single submitter
Method: clinical testing
|
Rippling muscle disease 2
Affected status: yes
Allele origin:
germline
|
MGZ Medical Genetics Center
Accession: SCV002581137.1
First in ClinVar: Oct 15, 2022 Last updated: Oct 15, 2022
Comment:
ACMG criteria applied: PS4, PS3_MOD, PM5, PM2_SUP, PP1, PP3
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Number of individuals with the variant: 1
Sex: male
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Pathogenic
(Oct 26, 2020)
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criteria provided, single submitter
Method: clinical testing
|
not provided
Affected status: unknown
Allele origin:
germline
|
Revvity Omics, Revvity
Accession: SCV002016931.3
First in ClinVar: Nov 29, 2021 Last updated: Feb 04, 2024 |
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Pathogenic
(May 31, 2018)
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criteria provided, single submitter
Method: curation
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Rippling muscle disease 2
Affected status: unknown
Allele origin:
unknown
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SIB Swiss Institute of Bioinformatics
Accession: SCV000803482.1
First in ClinVar: Apr 28, 2018 Last updated: Apr 28, 2018 |
Comment:
This variant is interpreted as a Pathogenic, for Caveolinopathies (creatine phosphokinase, elevated serum. HyperCKemia. Rippling muscle disease 2 (RMD2). Myopathy, distal, Tateyama type (MPDT). Limb-girdle … (more)
This variant is interpreted as a Pathogenic, for Caveolinopathies (creatine phosphokinase, elevated serum. HyperCKemia. Rippling muscle disease 2 (RMD2). Myopathy, distal, Tateyama type (MPDT). Limb-girdle muscular dystrophy 1C (LGMD1C)), in Autosomal Dominant manner. The following ACMG Tag(s) were applied: PP3 => Multiple lines of computational evidence support a deleterious effect on the gene or gene product. PM6 => Assumed de novo, but without confirmation of paternity and maternity (PMID:10746614). PS2 => De novo (paternity and maternity confirmed) (PMID:11756609). PS3 => Well-established functional studies show a deleterious effect (PMID:12939441) (PMID:15580566). PM2 => Absent from controls (or at extremely low frequency if recessive) in Exome Sequencing Project, 1000 Genomes Project, or Exome Aggregation Consortium. PS4-Moderate => PS4 downgraded in strength to Moderate. (less)
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Pathogenic
(Jun 22, 2018)
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criteria provided, single submitter
Method: clinical testing
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not provided
Affected status: unknown
Allele origin:
unknown
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Athena Diagnostics
Accession: SCV000841370.2
First in ClinVar: Dec 06, 2016 Last updated: Jan 26, 2021 |
Comment:
Not found in the total gnomAD dataset, and the data is high quality. Predicted to have a damaging effect on the protein. Assessment of experimental … (more)
Not found in the total gnomAD dataset, and the data is high quality. Predicted to have a damaging effect on the protein. Assessment of experimental evidence suggests this variant results in abnormal protein function. Very strong co-segregation with disease. However, available data lack unaffected family members. One de novo case with parental identity confirmed. (less)
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Pathogenic
(Nov 02, 2020)
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criteria provided, single submitter
Method: clinical testing
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Not provided
Affected status: unknown
Allele origin:
germline
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Mayo Clinic Laboratories, Mayo Clinic
Accession: SCV001715805.1
First in ClinVar: Jun 15, 2021 Last updated: Jun 15, 2021 |
Comment:
PS3, PS4, PM2, PP1, PP3, PP4
Number of individuals with the variant: 1
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Pathogenic
(Jul 26, 2021)
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criteria provided, single submitter
Method: clinical testing
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Elevated circulating creatine kinase concentration
Hypertrophic cardiomyopathy 1 Rippling muscle disease 2 Long QT syndrome 9 Distal myopathy, Tateyama type
Affected status: unknown
Allele origin:
unknown
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Fulgent Genetics, Fulgent Genetics
Accession: SCV002783793.1
First in ClinVar: Dec 31, 2022 Last updated: Dec 31, 2022 |
|
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Pathogenic
(Dec 18, 2023)
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criteria provided, single submitter
Method: clinical testing
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Long QT syndrome
Affected status: unknown
Allele origin:
germline
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Labcorp Genetics (formerly Invitae), Labcorp
Accession: SCV000627777.8
First in ClinVar: Dec 26, 2017 Last updated: Feb 14, 2024 |
Comment:
This sequence change replaces arginine, which is basic and polar, with glutamine, which is neutral and polar, at codon 27 of the CAV3 protein (p.Arg27Gln). … (more)
This sequence change replaces arginine, which is basic and polar, with glutamine, which is neutral and polar, at codon 27 of the CAV3 protein (p.Arg27Gln). This variant is not present in population databases (gnomAD no frequency). This missense change has been observed in individual(s) with distal myopathy, hyperCKemia, limb-girdle muscular dystrophy type 1C, and/or rippling muscle disease (PMID: 10746614, 11431690, 11756609, 11805270, 12807393, 12939441, 15318349, 15580566, 18583131, 18930476, 20472890, 21404291). In at least one individual the variant was observed to be de novo. It has also been observed to segregate with disease in related individuals. ClinVar contains an entry for this variant (Variation ID: 8283). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be disruptive. Experimental studies have shown that this missense change affects CAV3 function (PMID: 12839838, 14633633, 19380584, 20472890). For these reasons, this variant has been classified as Pathogenic. (less)
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Pathogenic
(Aug 27, 2024)
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criteria provided, single submitter
Method: clinical testing
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Distal myopathy, Tateyama type
(Autosomal dominant inheritance)
Affected status: yes
Allele origin:
germline
|
Institute of Medical Genetics and Applied Genomics, University Hospital Tübingen
Accession: SCV005200107.1
First in ClinVar: Sep 01, 2024 Last updated: Sep 01, 2024 |
Clinical Features:
Ptosis (present) , Cataract (present) , Stroke disorder (present) , Muscle weakness (present) , Muscular atrophy (present) , Myalgia (present) , Fatigable weakness (present) , … (more)
Ptosis (present) , Cataract (present) , Stroke disorder (present) , Muscle weakness (present) , Muscular atrophy (present) , Myalgia (present) , Fatigable weakness (present) , Skeletal muscle hypertrophy (present) , Abnormal muscle physiology (present) , Abnormal skeletal muscle morphology (present) , Fatty replacement of skeletal muscle (present) , Highly elevated creatine kinase (present) , Muscle fiber atrophy (present) (less)
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Pathogenic
(Mar 01, 2019)
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criteria provided, single submitter
Method: clinical testing
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not provided
Affected status: yes
Allele origin:
germline
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CeGaT Center for Human Genetics Tuebingen
Accession: SCV001248494.26
First in ClinVar: May 12, 2020 Last updated: Oct 20, 2024 |
Number of individuals with the variant: 4
|
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Pathogenic
(Sep 04, 2024)
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criteria provided, single submitter
Method: clinical testing
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Rippling muscle disease 2
Affected status: unknown
Allele origin:
germline
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Women's Health and Genetics/Laboratory Corporation of America, LabCorp
Accession: SCV005394004.1
First in ClinVar: Nov 17, 2024 Last updated: Nov 17, 2024 |
Comment:
Variant summary: CAV3 c.80G>A (p.Arg27Gln) results in a conservative amino acid change in the encoded protein sequence. Four of five in-silico tools predict a damaging … (more)
Variant summary: CAV3 c.80G>A (p.Arg27Gln) results in a conservative amino acid change in the encoded protein sequence. Four of five in-silico tools predict a damaging effect of the variant on protein function. The frequency data for this variant in gnomAD is considered unreliable, as metrics indicate poor data quality at this position. c.80G>A has been reported in the literature in multiple heterozygous individuals affected with Rippling Muscle Disease 2, Limb-Girdle Muscular Dystrophy Type 1C, or HyperCKemia (e.g. Vorgerd_2001, Carbone_2000, Fee_2004). In some individuals, the variant was observed to be de novo. These data indicate that the variant is very likely to be associated with disease. At least one publication reports experimental evidence evaluating an impact on protein function. The most pronounced variant effect results in reduced nerve growth factor signaling in transfected cells (Brauers_2010). The following publications have been ascertained in the context of this evaluation (PMID: 20472890, 10746614, 15318349, 11756609). ClinVar contains an entry for this variant (Variation ID: 8283). Based on the evidence outlined above, the variant was classified as pathogenic. (less)
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Pathogenic
(Oct 24, 2024)
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criteria provided, single submitter
Method: clinical testing
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Not Provided
Affected status: yes
Allele origin:
germline
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GeneDx
Accession: SCV000329203.7
First in ClinVar: Dec 06, 2016 Last updated: Nov 17, 2024 |
Comment:
Published functional studies demonstrate a damaging effect and suggest that this variant was prevented from reaching normal plasma membrane levels and was not enough to … (more)
Published functional studies demonstrate a damaging effect and suggest that this variant was prevented from reaching normal plasma membrane levels and was not enough to prevent leakage of CK to the serum (PMID: 12839838); In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; Not observed at significant frequency in large population cohorts (gnomAD); Missense variants in this gene are a common cause of disease and they are underrepresented in the general population; Also known as p.(R26Q); This variant is associated with the following publications: (PMID: 20472890, 11532985, 12939441, 21404291, 11756609, 12807393, 30723005, 35531120, 31036801, 25630502, 30174172, 28981925, 32528171, 15318349, 10746614, 12839838) (less)
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Pathogenic
(Jan 15, 2009)
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no assertion criteria provided
Method: literature only
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RIPPLING MUSCLE DISEASE 2
Affected status: not provided
Allele origin:
germline
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OMIM
Accession: SCV000028985.4
First in ClinVar: Apr 04, 2013 Last updated: Sep 30, 2018 |
Comment on evidence:
The numbering of this CAV3 mutation (R27Q) is based on the numbering system used by Fulizio et al. (2005). Early reports designated this mutation ARG26GLN. … (more)
The numbering of this CAV3 mutation (R27Q) is based on the numbering system used by Fulizio et al. (2005). Early reports designated this mutation ARG26GLN. In kindred B with autosomal dominant rippling muscle disease (RMD2; 606072) described by Vorgerd et al. (1999), Betz et al. (2001) identified an arg26-to-gln (R26Q) substitution in the CAV3 gene. In a patient with sporadic rippling muscle disease, Vorgerd et al. (2001) identified a heterozygous R26Q mutation in exon 1 of the CAV3 gene, which was not found in either parent. Muscle biopsy of the patient showed reduced sarcolemmal caveolin-3 with punctated cytosolic staining, consistent with intracellular retention of an unstable protein. Neuronal nitric oxide synthase (nNOS) expression was normal. Vorgerd et al. (2001) suggested that increased inducibility of nNOS, caused by lack of inhibition by normal caveolin, may contribute to muscle hyperexcitability in rippling muscle disease. In a 71-year-old woman with a diagnosis of limb-girdle muscular dystrophy (LGMD1C), which was reclassified by Straub et al. (2018) as rippling muscle disease (RMD2; 606072), Figarella-Branger et al. (2003) identified a heterozygous R26Q mutation, which they referred to as ARG27GLN. Muscle biopsy showed fibers of various sizes, centrally located nuclei, occasional necrotic and regenerative fibers, decreased dysferlin immunoreactivity, and near absence of caveolin-3. Although this was a late presentation, the authors could not rule out a very slow but myopathic evolution of a putative hyperCKemia in infancy. Figarella-Branger et al. (2003) emphasized the heterogeneous clinical phenotypes that had been reported in association with this CAV3 mutation. Carbone et al. (2000) identified a de novo recurrent sporadic mutation, R26Q, in the CAV3 gene in 2 unrelated children with persistent elevated levels of serum creatine kinase (hyperCKemia; 123320) without muscle weakness. Immunohistochemistry and quantitative immunoblot analysis of caveolin-3 showed reduced expression of the protein in muscle fibers. Carbone et al. (2000) concluded that partial caveolin-3 deficiency should be considered in the differential diagnosis of idiopathic hyperCKemia. In a Japanese woman with a relatively mild nonspecific sporadic distal myopathy (MPDT; 614321), Tateyama et al. (2002) identified the R26Q mutation. Muscle atrophy and weakness was limited to the small muscles of the hands and feet. She also showed increased creatine kinase, myopathic changes on biopsy and EMG, and decreased caveolin-3 and dysferlin (603009) immunoreactivity. Tateyama et al. (2002) noted the unusual clinical phenotype of the patient. Gonzalez-Perez et al. (2009) identified the R27Q mutation in a Spanish family with autosomal dominant inheritance of distal myopathy and increased serum creatine kinase. The proband was a 77-year-old man who had onset in his mid-forties of distal muscle weakness and atrophy, particularly affecting the thenar and hypothenar muscles in both hands, as well as the intrinsic finger muscles. Other features included calf hypertrophy, pes cavus, and percussion-induced rapid contractions, predominantly in distal muscles of upper limbs. He had 4 affected sons, 3 of whom presented in their twenties with increased serum creatine kinase, calf hypertrophy, and pes cavus; 1 had percussion-induced rapid contractions. All later developed distal muscle weakness and atrophy affecting the hands. The fourth son, aged 33 years, had increased serum creatine kinase and pes cavus, but no evidence of motor deficit. Two granddaughters of the proband had pes cavus and increased serum creatine kinase, but no motor deficit. One had percussion-induced rapid contractions and the other had myalgias. Muscle biopsy of the proband showed slight variation in fiber size and increased number of internal nuclei, but no dystrophic changes. Caveolin-3 expression was greatly reduced in the sarcolemma, and there was a moderate reduction of dysferlin immunolabeling. Electron microscopy revealed focal loss of sarcolemma, abnormal sarcolemmal folding, absence of normal caveolae, and enlarged subsarcolemmal space with large vacuoles. Gonzalez-Perez et al. (2009) noted the variable phenotypic features in this family. (less)
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Pathogenic
(Jan 15, 2009)
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no assertion criteria provided
Method: literature only
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MYOPATHY, DISTAL, TATEYAMA TYPE
Affected status: not provided
Allele origin:
germline
|
OMIM
Accession: SCV000044374.4
First in ClinVar: Apr 04, 2013 Last updated: Sep 30, 2018 |
Comment on evidence:
The numbering of this CAV3 mutation (R27Q) is based on the numbering system used by Fulizio et al. (2005). Early reports designated this mutation ARG26GLN. … (more)
The numbering of this CAV3 mutation (R27Q) is based on the numbering system used by Fulizio et al. (2005). Early reports designated this mutation ARG26GLN. In kindred B with autosomal dominant rippling muscle disease (RMD2; 606072) described by Vorgerd et al. (1999), Betz et al. (2001) identified an arg26-to-gln (R26Q) substitution in the CAV3 gene. In a patient with sporadic rippling muscle disease, Vorgerd et al. (2001) identified a heterozygous R26Q mutation in exon 1 of the CAV3 gene, which was not found in either parent. Muscle biopsy of the patient showed reduced sarcolemmal caveolin-3 with punctated cytosolic staining, consistent with intracellular retention of an unstable protein. Neuronal nitric oxide synthase (nNOS) expression was normal. Vorgerd et al. (2001) suggested that increased inducibility of nNOS, caused by lack of inhibition by normal caveolin, may contribute to muscle hyperexcitability in rippling muscle disease. In a 71-year-old woman with a diagnosis of limb-girdle muscular dystrophy (LGMD1C), which was reclassified by Straub et al. (2018) as rippling muscle disease (RMD2; 606072), Figarella-Branger et al. (2003) identified a heterozygous R26Q mutation, which they referred to as ARG27GLN. Muscle biopsy showed fibers of various sizes, centrally located nuclei, occasional necrotic and regenerative fibers, decreased dysferlin immunoreactivity, and near absence of caveolin-3. Although this was a late presentation, the authors could not rule out a very slow but myopathic evolution of a putative hyperCKemia in infancy. Figarella-Branger et al. (2003) emphasized the heterogeneous clinical phenotypes that had been reported in association with this CAV3 mutation. Carbone et al. (2000) identified a de novo recurrent sporadic mutation, R26Q, in the CAV3 gene in 2 unrelated children with persistent elevated levels of serum creatine kinase (hyperCKemia; 123320) without muscle weakness. Immunohistochemistry and quantitative immunoblot analysis of caveolin-3 showed reduced expression of the protein in muscle fibers. Carbone et al. (2000) concluded that partial caveolin-3 deficiency should be considered in the differential diagnosis of idiopathic hyperCKemia. In a Japanese woman with a relatively mild nonspecific sporadic distal myopathy (MPDT; 614321), Tateyama et al. (2002) identified the R26Q mutation. Muscle atrophy and weakness was limited to the small muscles of the hands and feet. She also showed increased creatine kinase, myopathic changes on biopsy and EMG, and decreased caveolin-3 and dysferlin (603009) immunoreactivity. Tateyama et al. (2002) noted the unusual clinical phenotype of the patient. Gonzalez-Perez et al. (2009) identified the R27Q mutation in a Spanish family with autosomal dominant inheritance of distal myopathy and increased serum creatine kinase. The proband was a 77-year-old man who had onset in his mid-forties of distal muscle weakness and atrophy, particularly affecting the thenar and hypothenar muscles in both hands, as well as the intrinsic finger muscles. Other features included calf hypertrophy, pes cavus, and percussion-induced rapid contractions, predominantly in distal muscles of upper limbs. He had 4 affected sons, 3 of whom presented in their twenties with increased serum creatine kinase, calf hypertrophy, and pes cavus; 1 had percussion-induced rapid contractions. All later developed distal muscle weakness and atrophy affecting the hands. The fourth son, aged 33 years, had increased serum creatine kinase and pes cavus, but no evidence of motor deficit. Two granddaughters of the proband had pes cavus and increased serum creatine kinase, but no motor deficit. One had percussion-induced rapid contractions and the other had myalgias. Muscle biopsy of the proband showed slight variation in fiber size and increased number of internal nuclei, but no dystrophic changes. Caveolin-3 expression was greatly reduced in the sarcolemma, and there was a moderate reduction of dysferlin immunolabeling. Electron microscopy revealed focal loss of sarcolemma, abnormal sarcolemmal folding, absence of normal caveolae, and enlarged subsarcolemmal space with large vacuoles. Gonzalez-Perez et al. (2009) noted the variable phenotypic features in this family. (less)
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Pathogenic
(Jan 15, 2009)
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no assertion criteria provided
Method: literature only
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CREATINE PHOSPHOKINASE, ELEVATED SERUM
Affected status: not provided
Allele origin:
germline
|
OMIM
Accession: SCV000028986.4
First in ClinVar: Apr 04, 2013 Last updated: Sep 30, 2018 |
Comment on evidence:
The numbering of this CAV3 mutation (R27Q) is based on the numbering system used by Fulizio et al. (2005). Early reports designated this mutation ARG26GLN. … (more)
The numbering of this CAV3 mutation (R27Q) is based on the numbering system used by Fulizio et al. (2005). Early reports designated this mutation ARG26GLN. In kindred B with autosomal dominant rippling muscle disease (RMD2; 606072) described by Vorgerd et al. (1999), Betz et al. (2001) identified an arg26-to-gln (R26Q) substitution in the CAV3 gene. In a patient with sporadic rippling muscle disease, Vorgerd et al. (2001) identified a heterozygous R26Q mutation in exon 1 of the CAV3 gene, which was not found in either parent. Muscle biopsy of the patient showed reduced sarcolemmal caveolin-3 with punctated cytosolic staining, consistent with intracellular retention of an unstable protein. Neuronal nitric oxide synthase (nNOS) expression was normal. Vorgerd et al. (2001) suggested that increased inducibility of nNOS, caused by lack of inhibition by normal caveolin, may contribute to muscle hyperexcitability in rippling muscle disease. In a 71-year-old woman with a diagnosis of limb-girdle muscular dystrophy (LGMD1C), which was reclassified by Straub et al. (2018) as rippling muscle disease (RMD2; 606072), Figarella-Branger et al. (2003) identified a heterozygous R26Q mutation, which they referred to as ARG27GLN. Muscle biopsy showed fibers of various sizes, centrally located nuclei, occasional necrotic and regenerative fibers, decreased dysferlin immunoreactivity, and near absence of caveolin-3. Although this was a late presentation, the authors could not rule out a very slow but myopathic evolution of a putative hyperCKemia in infancy. Figarella-Branger et al. (2003) emphasized the heterogeneous clinical phenotypes that had been reported in association with this CAV3 mutation. Carbone et al. (2000) identified a de novo recurrent sporadic mutation, R26Q, in the CAV3 gene in 2 unrelated children with persistent elevated levels of serum creatine kinase (hyperCKemia; 123320) without muscle weakness. Immunohistochemistry and quantitative immunoblot analysis of caveolin-3 showed reduced expression of the protein in muscle fibers. Carbone et al. (2000) concluded that partial caveolin-3 deficiency should be considered in the differential diagnosis of idiopathic hyperCKemia. In a Japanese woman with a relatively mild nonspecific sporadic distal myopathy (MPDT; 614321), Tateyama et al. (2002) identified the R26Q mutation. Muscle atrophy and weakness was limited to the small muscles of the hands and feet. She also showed increased creatine kinase, myopathic changes on biopsy and EMG, and decreased caveolin-3 and dysferlin (603009) immunoreactivity. Tateyama et al. (2002) noted the unusual clinical phenotype of the patient. Gonzalez-Perez et al. (2009) identified the R27Q mutation in a Spanish family with autosomal dominant inheritance of distal myopathy and increased serum creatine kinase. The proband was a 77-year-old man who had onset in his mid-forties of distal muscle weakness and atrophy, particularly affecting the thenar and hypothenar muscles in both hands, as well as the intrinsic finger muscles. Other features included calf hypertrophy, pes cavus, and percussion-induced rapid contractions, predominantly in distal muscles of upper limbs. He had 4 affected sons, 3 of whom presented in their twenties with increased serum creatine kinase, calf hypertrophy, and pes cavus; 1 had percussion-induced rapid contractions. All later developed distal muscle weakness and atrophy affecting the hands. The fourth son, aged 33 years, had increased serum creatine kinase and pes cavus, but no evidence of motor deficit. Two granddaughters of the proband had pes cavus and increased serum creatine kinase, but no motor deficit. One had percussion-induced rapid contractions and the other had myalgias. Muscle biopsy of the proband showed slight variation in fiber size and increased number of internal nuclei, but no dystrophic changes. Caveolin-3 expression was greatly reduced in the sarcolemma, and there was a moderate reduction of dysferlin immunolabeling. Electron microscopy revealed focal loss of sarcolemma, abnormal sarcolemmal folding, absence of normal caveolae, and enlarged subsarcolemmal space with large vacuoles. Gonzalez-Perez et al. (2009) noted the variable phenotypic features in this family. (less)
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not provided
(Apr 15, 2012)
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no classification provided
Method: curation
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MYOPATHY, DISTAL, TATEYAMA TYPE
Affected status: not provided
Allele origin:
de novo,
germline
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Leiden Muscular Dystrophy (CAV3)
Accession: SCV000045677.1
First in ClinVar: Apr 04, 2013 Last updated: Apr 04, 2013 |
Observation 1: Observation 2: |
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Germline Functional Evidence
Functional
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The functional consequence of the variant, based on experimental evidence and provided by the submitter. consequence |
Method
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A brief description of the method used to determine the functional consequence of the variant. A citation for the method is included, when provided by the submitter. |
Result
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A brief description of the result of this method for this variant. |
Submitter
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The submitting organization for this submitted (SCV) record. This column also includes the SCV accession and version number, the date this SCV first appeared in ClinVar, and the date that this SCV was last updated in ClinVar. |
More information
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This column includes more information supporting functional evidence for the germline classification, including citations, the comment on classification, and detailed evidence provided as observations of the variant by the submitter. |
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has functional consequence
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Leiden Muscular Dystrophy (CAV3)
Accession: SCV000045677.1
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Citations for germline classification of this variant
HelpTitle | Author | Journal | Year | Link |
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Dystrophy-associated caveolin-3 mutations reveal that caveolae couple IL6/STAT3 signaling with mechanosensing in human muscle cells. | Dewulf M | Nature communications | 2019 | PMID: 31036801 |
Coexistence of a CAV3 mutation and a DMD deletion in a family with complex muscular diseases. | Hiraide T | Brain & development | 2019 | PMID: 30723005 |
Characteristic findings of skeletal muscle MRI in caveolinopathies. | Ishiguro K | Neuromuscular disorders : NMD | 2018 | PMID: 30174172 |
229th ENMC international workshop: Limb girdle muscular dystrophies - Nomenclature and reformed classification Naarden, the Netherlands, 17-19 March 2017. | Straub V | Neuromuscular disorders : NMD | 2018 | PMID: 30055862 |
[Clinical and genetic study of a Chinese family affected with caveolinopathies]. | Nie H | Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics | 2017 | PMID: 28981925 |
Endoplasmic reticulum stress response in P104L mutant caveolin-3 transgenic mice. | Kuga A | Human molecular genetics | 2011 | PMID: 21610159 |
Rippling is not always electrically silent in rippling muscle disease. | Maki T | Muscle & nerve | 2011 | PMID: 21404291 |
Differential effects of myopathy-associated caveolin-3 mutants on growth factor signaling. | Brauers E | The American journal of pathology | 2010 | PMID: 20472890 |
Membrane repair defects in muscular dystrophy are linked to altered interaction between MG53, caveolin-3, and dysferlin. | Cai C | The Journal of biological chemistry | 2009 | PMID: 19380584 |
Phenotypic variability in a Spanish family with a Caveolin-3 mutation. | González-Pérez P | Journal of the neurological sciences | 2009 | PMID: 18930476 |
Caveolinopathy--new mutations and additional symptoms. | Aboumousa A | Neuromuscular disorders : NMD | 2008 | PMID: 18583131 |
Molecular and muscle pathology in a series of caveolinopathy patients. | Fulizio L | Human mutation | 2005 | PMID: 15580566 |
Two novel CAV3 gene mutations in Japanese families. | Sugie K | Neuromuscular disorders : NMD | 2004 | PMID: 15564037 |
Phenotypic variability associated with Arg26Gln mutation in caveolin3. | Fee DB | Muscle & nerve | 2004 | PMID: 15318349 |
Phosphofructokinase muscle-specific isoform requires caveolin-3 expression for plasma membrane recruitment and caveolar targeting: implications for the pathogenesis of caveolin-related muscle diseases. | Sotgia F | The American journal of pathology | 2003 | PMID: 14633633 |
Limb-girdle muscular dystrophy in a 71-year-old woman with an R27Q mutation in the CAV3 gene. | Figarella-Branger D | Neurology | 2003 | PMID: 12939441 |
Phenotypic behavior of caveolin-3 R26Q, a mutant associated with hyperCKemia, distal myopathy, and rippling muscle disease. | Sotgia F | American journal of physiology. Cell physiology | 2003 | PMID: 12839838 |
Caveolin-3 gene mutation in Japanese with rippling muscle disease. | Yabe I | Acta neurologica Scandinavica | 2003 | PMID: 12807393 |
Mutation in the caveolin-3 gene causes a peculiar form of distal myopathy. | Tateyama M | Neurology | 2002 | PMID: 11805270 |
A sporadic case of rippling muscle disease caused by a de novo caveolin-3 mutation. | Vorgerd M | Neurology | 2001 | PMID: 11756609 |
Mutations in CAV3 cause mechanical hyperirritability of skeletal muscle in rippling muscle disease. | Betz RC | Nature genetics | 2001 | PMID: 11431690 |
Mutation in the CAV3 gene causes partial caveolin-3 deficiency and hyperCKemia. | Carbone I | Neurology | 2000 | PMID: 10746614 |
Phenotypic variability in rippling muscle disease. | Vorgerd M | Neurology | 1999 | PMID: 10227634 |
http://www.egl-eurofins.com/emvclass/emvclass.php?approved_symbol=CAV3 | - | - | - | - |
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Text-mined citations for rs116840778 ...
HelpRecord last updated Nov 19, 2024
This date represents the last time this VCV record was updated. The update may be due to an update to one of the included submitted records (SCVs), or due to an update that ClinVar made to the variant such as adding HGVS expressions or a rs number. So this date may be different from the date of the “most recent submission” reported at the top of this page.