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NM_004329.3(BMPR1A):c.869-11C>T AND Juvenile polyposis syndrome

Germline classification:
Likely benign (1 submission)
Last evaluated:
Aug 5, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004788896.1

Allele description [Variation Report for NM_004329.3(BMPR1A):c.869-11C>T]

NM_004329.3(BMPR1A):c.869-11C>T

Gene:
BMPR1A:bone morphogenetic protein receptor type 1A [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
10q23.2
Genomic location:
Preferred name:
NM_004329.3(BMPR1A):c.869-11C>T
HGVS:
  • NC_000010.11:g.86919161C>T
  • NG_009362.1:g.167523C>T
  • NM_001406559.1:c.944-11C>T
  • NM_001406560.1:c.917-11C>T
  • NM_001406561.1:c.869-11C>T
  • NM_001406562.1:c.869-11C>T
  • NM_001406563.1:c.869-11C>T
  • NM_001406564.1:c.869-11C>T
  • NM_001406565.1:c.869-11C>T
  • NM_001406566.1:c.869-11C>T
  • NM_001406567.1:c.869-11C>T
  • NM_001406568.1:c.869-11C>T
  • NM_001406569.1:c.869-11C>T
  • NM_001406570.1:c.869-11C>T
  • NM_001406571.1:c.869-11C>T
  • NM_001406572.1:c.869-11C>T
  • NM_001406573.1:c.869-11C>T
  • NM_001406574.1:c.869-11C>T
  • NM_001406575.1:c.869-11C>T
  • NM_001406576.1:c.869-11C>T
  • NM_001406577.1:c.869-11C>T
  • NM_001406578.1:c.869-11C>T
  • NM_001406579.1:c.869-11C>T
  • NM_001406580.1:c.869-11C>T
  • NM_001406581.1:c.869-11C>T
  • NM_001406582.1:c.869-11C>T
  • NM_001406583.1:c.863-11C>T
  • NM_001406584.1:c.785-11C>T
  • NM_001406585.1:c.785-11C>T
  • NM_001406586.1:c.785-11C>T
  • NM_001406587.1:c.785-11C>T
  • NM_001406588.1:c.785-11C>T
  • NM_001406589.1:c.527-11C>T
  • NM_004329.3:c.869-11C>TMANE SELECT
  • LRG_298:g.167523C>T
  • NC_000010.10:g.88678918C>T
Molecular consequence:
  • NM_001406559.1:c.944-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406560.1:c.917-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406561.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406562.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406563.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406564.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406565.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406566.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406567.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406568.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406569.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406570.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406571.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406572.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406573.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406574.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406575.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406576.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406577.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406578.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406579.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406580.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406581.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406582.1:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406583.1:c.863-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406584.1:c.785-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406585.1:c.785-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406586.1:c.785-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406587.1:c.785-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406588.1:c.785-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001406589.1:c.527-11C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_004329.3:c.869-11C>T - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
Juvenile polyposis syndrome (JPS)
Synonyms:
Polyposis juvenile intestinal; Polyposis familial of entire gastrointestinal tract
Identifiers:
MONDO: MONDO:0017380; MedGen: C0345893; Orphanet: 2929; OMIM: 174900

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Assertion and evidence details

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Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV005405708Myriad Genetics, Inc.
criteria provided, single submitter

(Myriad Autosomal Dominant, Autosomal Recessive and X-Linked Classification Criteria (2023))		Likely benign
(Aug 5, 2024) 		unknownclinical testing

Citation Link

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Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Myriad Genetics, Inc., SCV005405708.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This variant is considered likely benign. This variant is intronic and is not expected to impact mRNA splicing.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 30, 2024