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NM_004562.3(PRKN):c.823C>T (p.Arg275Trp) AND Ovarian cancer

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jun 1, 2022
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004766985.1

Allele description [Variation Report for NM_004562.3(PRKN):c.823C>T (p.Arg275Trp)]

NM_004562.3(PRKN):c.823C>T (p.Arg275Trp)

Gene:
PRKN:parkin RBR E3 ubiquitin protein ligase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q26
Genomic location:
Preferred name:
NM_004562.3(PRKN):c.823C>T (p.Arg275Trp)
HGVS:
  • NC_000006.12:g.161785820G>A
  • NG_008289.2:g.946983C>T
  • NM_004562.3:c.823C>TMANE SELECT
  • NM_013987.3:c.739C>T
  • NM_013988.3:c.376C>T
  • NP_004553.2:p.Arg275Trp
  • NP_054642.2:p.Arg247Trp
  • NP_054643.2:p.Arg126Trp
  • NC_000006.11:g.162206852G>A
  • NM_004562.2:c.823C>T
  • O60260:p.Arg275Trp
Protein change:
R126W; ARG275TRP
Links:
UniProtKB: O60260#VAR_019752; OMIM: 602544.0017; dbSNP: rs34424986
NCBI 1000 Genomes Browser:
rs34424986
Molecular consequence:
  • NM_004562.3:c.823C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_013987.3:c.739C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_013988.3:c.376C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Ovarian cancer
Synonyms:
OVARIAN CANCER, SOMATIC
Identifiers:
MONDO: MONDO:0008170; MedGen: C1140680; OMIM: 167000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV005091301Solve-RD Consortium
no assertion criteria provided
Likely pathogenic
(Jun 1, 2022)
inheritedprovider interpretation

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedinheritedyesnot providednot providednot providednot providednot providedprovider interpretation

Details of each submission

From Solve-RD Consortium, SCV005091301.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedprovider interpretationnot provided

Description

Variant confirmed as disease-causing by referring clinical team

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1inheritedyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jan 25, 2025