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NM_000463.3(UGT1A1):c.584G>A (p.Arg195Lys) AND UGT1A1-related disorder

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jun 25, 2024
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004738166.1

Allele description [Variation Report for NM_000463.3(UGT1A1):c.584G>A (p.Arg195Lys)]

NM_000463.3(UGT1A1):c.584G>A (p.Arg195Lys)

Genes:
  • UGT1A:UDP glucuronosyltransferase family 1 member A complex locus [Gene - HGNC]
  • UGT1A10:UDP glucuronosyltransferase family 1 member A10 [Gene - OMIM - HGNC]
  • UGT1A1:UDP glucuronosyltransferase family 1 member A1 [Gene - OMIM - HGNC]
  • UGT1A3:UDP glucuronosyltransferase family 1 member A3 [Gene - OMIM - HGNC]
  • UGT1A4:UDP glucuronosyltransferase family 1 member A4 [Gene - OMIM - HGNC]
  • UGT1A5:UDP glucuronosyltransferase family 1 member A5 [Gene - OMIM - HGNC]
  • UGT1A6:UDP glucuronosyltransferase family 1 member A6 [Gene - OMIM - HGNC]
  • UGT1A7:UDP glucuronosyltransferase family 1 member A7 [Gene - OMIM - HGNC]
  • UGT1A8:UDP glucuronosyltransferase family 1 member A8 [Gene - OMIM - HGNC]
  • UGT1A9:UDP glucuronosyltransferase family 1 member A9 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2q37.1
Genomic location:
Preferred name:
NM_000463.3(UGT1A1):c.584G>A (p.Arg195Lys)
HGVS:
  • NC_000002.12:g.233760871G>A
  • NG_002601.2:g.176128G>A
  • NG_033238.1:g.5599G>A
  • NM_000463.3:c.584G>AMANE SELECT
  • NM_001072.4:c.862-6163G>AMANE SELECT
  • NM_007120.3:c.868-6163G>AMANE SELECT
  • NM_019075.4:c.856-6163G>AMANE SELECT
  • NM_019076.5:c.856-6163G>AMANE SELECT
  • NM_019077.3:c.856-6163G>AMANE SELECT
  • NM_019078.2:c.868-6163G>AMANE SELECT
  • NM_019093.4:c.868-6163G>AMANE SELECT
  • NM_021027.3:c.856-6163G>AMANE SELECT
  • NM_205862.3:c.61-6163G>A
  • NP_000454.1:p.Arg195Lys
  • NP_000454.1:p.Arg195Lys
  • LRG_733t1:c.584G>A
  • LRG_733:g.5599G>A
  • LRG_733p1:p.Arg195Lys
  • NC_000002.11:g.234669517G>A
  • NC_000002.11:g.234669517G>A
  • NM_000463.2:c.584G>A
Protein change:
R195K
Links:
dbSNP: rs767764203
NCBI 1000 Genomes Browser:
rs767764203
Molecular consequence:
  • NM_001072.4:c.862-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_007120.3:c.868-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_019075.4:c.856-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_019076.5:c.856-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_019077.3:c.856-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_019078.2:c.868-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_019093.4:c.868-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_021027.3:c.856-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_205862.3:c.61-6163G>A - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000463.3:c.584G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
UGT1A1-related disorder
Synonyms:
UGT1A1-Related Disorders; UGT1A1-related condition
Identifiers:

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV005346333PreventionGenetics, part of Exact Sciences
no assertion criteria provided
Uncertain significance
(Jun 25, 2024) 		germlineclinical testing

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From PreventionGenetics, part of Exact Sciences, SCV005346333.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The UGT1A1 c.584G>A variant is predicted to result in the amino acid substitution p.Arg195Lys. To our knowledge, this variant has not been reported in the literature. This variant is reported in 0.015% of alleles in individuals of European (Non-Finnish) descent in gnomAD. At this time, the clinical significance of this variant is uncertain due to the absence of conclusive functional and genetic evidence.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 13, 2024