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NM_000018.4(ACADVL):c.1054A>G (p.Met352Val) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jul 18, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004701786.1

Allele description [Variation Report for NM_000018.4(ACADVL):c.1054A>G (p.Met352Val)]

NM_000018.4(ACADVL):c.1054A>G (p.Met352Val)

Gene:
ACADVL:acyl-CoA dehydrogenase very long chain [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17p13.1
Genomic location:
Preferred name:
NM_000018.4(ACADVL):c.1054A>G (p.Met352Val)
Other names:
p.Met352Val
HGVS:
  • NC_000017.11:g.7222842A>G
  • NG_007975.1:g.8009A>G
  • NG_008391.2:g.2209T>C
  • NG_008391.3:g.2208T>C
  • NM_000018.4:c.1054A>GMANE SELECT
  • NM_001033859.3:c.988A>G
  • NM_001270447.2:c.1123A>G
  • NM_001270448.2:c.826A>G
  • NP_000009.1:p.Met352Val
  • NP_001029031.1:p.Met330Val
  • NP_001257376.1:p.Met375Val
  • NP_001257377.1:p.Met276Val
  • NC_000017.10:g.7126161A>G
Protein change:
M276V
Molecular consequence:
  • NM_000018.4:c.1054A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001033859.3:c.988A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270447.2:c.1123A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270448.2:c.826A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV005203416Women's Health and Genetics/Laboratory Corporation of America, LabCorp
criteria provided, single submitter

(LabCorp Variant Classification Summary - May 2015)
Uncertain significance
(Jul 18, 2024)
germlineclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Clear correlation of genotype with disease phenotype in very-long-chain acyl-CoA dehydrogenase deficiency.

Andresen BS, Olpin S, Poorthuis BJ, Scholte HR, Vianey-Saban C, Wanders R, Ijlst L, Morris A, Pourfarzam M, Bartlett K, Baumgartner ER, deKlerk JB, Schroeder LD, Corydon TJ, Lund H, Winter V, Bross P, Bolund L, Gregersen N.

Am J Hum Genet. 1999 Feb;64(2):479-94.

PubMed [citation]
PMID:
9973285
PMCID:
PMC1377757

Application of a next-generation sequencing (NGS) panel in newborn screening efficiently identifies inborn disorders of neonates.

Huang X, Wu D, Zhu L, Wang W, Yang R, Yang J, He Q, Zhu B, You Y, Xiao R, Zhao Z.

Orphanet J Rare Dis. 2022 Feb 21;17(1):66. doi: 10.1186/s13023-022-02231-x.

PubMed [citation]
PMID:
35193651
PMCID:
PMC8862216

Details of each submission

From Women's Health and Genetics/Laboratory Corporation of America, LabCorp, SCV005203416.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (2)

Description

Variant summary: ACADVL c.1054A>G (p.Met352Val) results in a conservative amino acid change located in the Acyl-CoA dehydrogenase/oxidase, C-terminal domain (IPR009075) of the encoded protein sequence. Three of five in-silico tools predict a benign effect of the variant on protein function. The variant was absent in 250952 control chromosomes. The available data on variant occurrences in the general population are insufficient to allow any conclusion about variant significance. c.1054A>G has been reported in the literature in an unknown or presumed compound heterozygous state in at least 2 individuals affected with Very Long Chain Acyl-CoA Dehydrogenase Deficiency (example, Andresen_1999, Huang_2022), including in at least 1 individual undergoing newborn screening. These report(s) do not provide unequivocal conclusions about association of the variant with Very Long Chain Acyl-CoA Dehydrogenase Deficiency. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported. The following publications have been ascertained in the context of this evaluation (PMID: 9973285, 35193651). ClinVar contains an entry for this variant (Variation ID: 2851878). Based on the evidence outlined above, the variant was classified as uncertain significance.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024