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NM_001014809.3(CRMP1):c.1755del (p.Lys586fs) AND See cases

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jan 15, 2024
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004698409.1

Allele description [Variation Report for NM_001014809.3(CRMP1):c.1755del (p.Lys586fs)]

NM_001014809.3(CRMP1):c.1755del (p.Lys586fs)

Genes:
EVC:EvC ciliary complex subunit 1 [Gene - OMIM - HGNC]
CRMP1:collapsin response mediator protein 1 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
4p16.2
Genomic location:
Preferred name:
NM_001014809.3(CRMP1):c.1755del (p.Lys586fs)
HGVS:
  • NC_000004.12:g.5828538del
  • NG_008843.2:g.122339del
  • NM_001014809.3:c.1755delMANE SELECT
  • NM_001288661.2:c.1407del
  • NM_001288662.1:c.1395del
  • NM_001313.5:c.1413del
  • NP_001014809.1:p.Lys586fs
  • NP_001275590.1:p.Lys470fs
  • NP_001275591.1:p.Lys466fs
  • NP_001304.1:p.Lys472fs
  • NC_000004.11:g.5830265del
  • NM_001014809.3:c.1755delGMANE SELECT
Protein change:
K466fs
Molecular consequence:
  • NM_001014809.3:c.1755del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001288661.2:c.1407del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001288662.1:c.1395del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001313.5:c.1413del - frameshift variant - [Sequence Ontology: SO:0001589]
Observations:
1

Condition(s)

Name:
See cases [See the Variation display for details]
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV005196589Pediatrics, Mianyang Central Hospital
no assertion criteria provided
Likely pathogenic
Score: 0
(Jan 15, 2024)
de novoclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedde novoyes1not providednot providednot providednot providedclinical testing

Details of each submission

From Pediatrics, Mianyang Central Hospital, SCV005196589.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
11not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1de novoyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Sep 1, 2024