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NM_017780.4(CHD7):c.3071C>T (p.Pro1024Leu) AND CHARGE syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jul 13, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004556958.1

Allele description [Variation Report for NM_017780.4(CHD7):c.3071C>T (p.Pro1024Leu)]

NM_017780.4(CHD7):c.3071C>T (p.Pro1024Leu)

Gene:
CHD7:chromodomain helicase DNA binding protein 7 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
8q12.2
Genomic location:
Preferred name:
NM_017780.4(CHD7):c.3071C>T (p.Pro1024Leu)
HGVS:
  • NC_000008.11:g.60822616C>T
  • NG_007009.1:g.148837C>T
  • NM_001316690.1:c.1717-39613C>T
  • NM_017780.4:c.3071C>TMANE SELECT
  • NP_060250.2:p.Pro1024Leu
  • NP_060250.2:p.Pro1024Leu
  • LRG_176t1:c.3071C>T
  • LRG_176:g.148837C>T
  • LRG_176p1:p.Pro1024Leu
  • NC_000008.10:g.61735175C>T
  • NM_017780.2:c.3071C>T
Protein change:
P1024L
Molecular consequence:
  • NM_001316690.1:c.1717-39613C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_017780.4:c.3071C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
CHARGE syndrome (CHARGE)
Synonyms:
CHARGE ASSOCIATION--COLOBOMA, HEART ANOMALY, CHOANAL ATRESIA, RETARDATION, GENITAL AND EAR ANOMALIES; Coloboma, heart anomaly, choanal atresia, retardation, genital and ear anomalies; CHARGE association; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0008965; MedGen: C0265354; Orphanet: 138; OMIM: 214800

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV005045608MVZ Medizinische Genetik Mainz
criteria provided, single submitter

(UK Practice Guidelines For Variant Classification V4 01 2020)
Uncertain significance
(Jul 13, 2023)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Details of each submission

From MVZ Medizinische Genetik Mainz, SCV005045608.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided

Description

ACMG Criteria: PP3_STR,PM2_SUP

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Jun 9, 2024