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NM_003280.3(TNNC1):c.430A>G (p.Asn144Asp) AND TNNC1-related disorder

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Jan 3, 2024
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003952794.3

Allele description [Variation Report for NM_003280.3(TNNC1):c.430A>G (p.Asn144Asp)]

NM_003280.3(TNNC1):c.430A>G (p.Asn144Asp)

Gene:
TNNC1:troponin C1, slow skeletal and cardiac type [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p21.1
Genomic location:
Preferred name:
NM_003280.3(TNNC1):c.430A>G (p.Asn144Asp)
Other names:
p.N144D:AAC>GAC
HGVS:
  • NC_000003.12:g.52451415T>C
  • NG_008963.1:g.7627A>G
  • NG_033112.1:g.908T>C
  • NM_003280.3:c.430A>GMANE SELECT
  • NP_003271.1:p.Asn144Asp
  • LRG_378t1:c.430A>G
  • LRG_378:g.7627A>G
  • NC_000003.11:g.52485431T>C
  • NM_003280.2:c.430A>G
Protein change:
N144D
Links:
dbSNP: rs730881061
NCBI 1000 Genomes Browser:
rs730881061
Molecular consequence:
  • NM_003280.3:c.430A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
TNNC1-related disorder
Synonyms:
TNNC1-related condition
Identifiers:

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004774068PreventionGenetics, part of Exact Sciences
no assertion criteria provided
Likely pathogenic
(Jan 3, 2024)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From PreventionGenetics, part of Exact Sciences, SCV004774068.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The TNNC1 c.430A>G variant is predicted to result in the amino acid substitution p.Asn144Asp. This variant has been reported in multiple individuals with hypertrophic or dilated cardiomyopathy or heart failure (Table S1, Lopes et al. 2014. PubMed ID: 25351510; Robyns et al. 2017. PubMed ID: 29255176; Lu et al. 2018. PubMed ID: 30165862; Table S1, Robyns et al. 2019. PubMed ID: 31513939; File S2, van Lint et al. 2019. PubMed ID: 30847666; Table S2, Magrì et al. 2020. PubMed ID: 32481709; Table S4, Verdonschot et al. 2020. PubMed ID: 32880476). In one family this variant was found to segregate with hypertrophic cardiomyopathy in three individuals (Robyns et al. 2017. PubMed ID: 29255176). This variant has not been reported in a large population database, indicating this variant is rare. In ClinVar, this variant has conflicting interpretations of pathogenicity, including uncertain, likely pathogenic, and pathogenic (https://www.ncbi.nlm.nih.gov/clinvar/variation/181567/). This variant is interpreted as likely pathogenic.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 24, 2024