U.S. flag

An official website of the United States government

NM_019032.6(ADAMTSL4):c.1143del (p.Glu382fs) AND Ectopia lentis 2, isolated, autosomal recessive

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Apr 11, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003339791.1

Allele description [Variation Report for NM_019032.6(ADAMTSL4):c.1143del (p.Glu382fs)]

NM_019032.6(ADAMTSL4):c.1143del (p.Glu382fs)

Genes:
ADAMTSL4:ADAMTS like 4 [Gene - OMIM - HGNC]
ADAMTSL4-AS2:ADAMTSL4 antisense RNA 2 [Gene - HGNC]
Variant type:
Deletion
Cytogenetic location:
1q21.2
Genomic location:
Preferred name:
NM_019032.6(ADAMTSL4):c.1143del (p.Glu382fs)
HGVS:
  • NC_000001.11:g.150554376del
  • NG_012172.1:g.9955del
  • NM_001288607.2:c.1143del
  • NM_001288608.2:c.1143del
  • NM_001378596.1:c.1143del
  • NM_019032.5:c.1143del
  • NM_019032.6:c.1143delMANE SELECT
  • NM_025008.5:c.1143del
  • NP_001275536.1:p.Glu382fs
  • NP_001275537.1:p.Glu382fs
  • NP_001365525.1:p.Glu382fs
  • NP_061905.2:p.Glu382fs
  • NP_079284.2:p.Glu382fs
  • NC_000001.10:g.150526852del
  • NM_019032.5:c.1143delT
  • NM_019032.6:c.1143del
Protein change:
E382fs
Links:
dbSNP: rs1461665171
NCBI 1000 Genomes Browser:
rs1461665171
Molecular consequence:
  • NM_001288607.2:c.1143del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001288608.2:c.1143del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001378596.1:c.1143del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_019032.6:c.1143del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_025008.5:c.1143del - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Ectopia lentis 2, isolated, autosomal recessive (ECTOL2)
Synonyms:
Ectopia lentis, isolated autosomal recessive
Identifiers:
MONDO: MONDO:0009152; MedGen: C3541474; Orphanet: 1885; OMIM: 225100

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV004049199Genome-Nilou Lab
criteria provided, single submitter

(ACMG Guidelines, 2015)		Likely pathogenic
(Apr 11, 2023) 		germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenonot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Genome-Nilou Lab, SCV004049199.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenonot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 26, 2024