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NM_000439.5(PCSK1):c.541T>C (p.Tyr181His) AND multiple conditions

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 24, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV002497582.1

Allele description [Variation Report for NM_000439.5(PCSK1):c.541T>C (p.Tyr181His)]

NM_000439.5(PCSK1):c.541T>C (p.Tyr181His)

Genes:
CAST:calpastatin [Gene - OMIM - HGNC]
PCSK1:proprotein convertase subtilisin/kexin type 1 [Gene - OMIM - HGNC]
LOC101929710:uncharacterized LOC101929710 [Gene]
Variant type:
single nucleotide variant
Cytogenetic location:
5q15
Genomic location:
Preferred name:
NM_000439.5(PCSK1):c.541T>C (p.Tyr181His)
HGVS:
  • NC_000005.10:g.96423315A>G
  • NG_021161.1:g.14967T>C
  • NM_000439.5:c.541T>CMANE SELECT
  • NM_001177875.2:c.400T>C
  • NP_000430.3:p.Tyr181His
  • NP_001171346.1:p.Tyr134His
  • NC_000005.9:g.95759019A>G
  • NM_000439.4:c.541T>C
Protein change:
Y134H
Links:
dbSNP: rs145592525
NCBI 1000 Genomes Browser:
rs145592525
Molecular consequence:
  • NM_000439.5:c.541T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001177875.2:c.400T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Body mass index quantitative trait locus 12 (BMIQ12)
Synonyms:
OBESITY (BMIQ12), SUSCEPTIBILITY TO; Obesity, susceptibility to, BMIQ12
Identifiers:
MedGen: C2676498; OMIM: 612362
Name:
Obesity due to prohormone convertase I deficiency
Synonyms:
OBESITY AND ENDOCRINOPATHY DUE TO IMPAIRED PROCESSING OF PROHORMONES; Proprotein convertase 1/3 deficiency
Identifiers:
MONDO: MONDO:0010961; MedGen: C1833053; Orphanet: 71528; OMIM: 600955

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV002806880Fulgent Genetics, Fulgent Genetics
criteria provided, single submitter

(ACMG Guidelines, 2015)		Uncertain significance
(Jan 24, 2022) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee.

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Fulgent Genetics, Fulgent Genetics, SCV002806880.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 13, 2024